| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1859742 | 27 (1.000) | 7 (0.280) | 5/270 | 2.4 | 19.0% | intergenic (+73/‑238) | PP_1658/PP_1659 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | = 1859773 | 35 (1.410) | intergenic (+104/‑207) | PP_1658/PP_1659 | hypothetical protein/hypothetical protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGCTGCTCAACAGCCATGTCGAGGAAACGGACGAAGACGACCCGTACGCGGCTTACAAGATCCCTGATGATCTGATGTGGTAAGCACGAAAATCCCGCCTTGGCGTTAATGCGGTTCATTCAAGATCGCAGGGCCGCTCTGCGGCCCTTTCGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1859587‑1859742‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctttcgcgacGCAAGGCCAGCGTCTTCTAGAGAACGCGCGTGTCGCGAAAGGGCCGCAGAGCGGCCCTGCGATCTTGAATGAACCGCATTAACGCCAAGGCGGGATTTTCGTGCTTACCACATCAGATCATCAGGGATCTTGTAAGCCGCGTACG < NC_002947/1859773‑1859629 TGCTGCTCCACAGCCATGTCGAGGAAACGGACGAAGACGACCCGTACGCGGCTTACAAGATCCCTGATGATCTGATGTGGTAAGCACGAAAATCCCGCCTTGGCGTTAATGCGGTTCATTCAAGATCGCAGGGCCGCTCTGCGGCCCTTT < 2:573419/150‑1TGCTGCTCAACAGCCATGTCGAGGAAACGGACGAAGACGACCCGTACGCGGCTTACAAGATCCCTGATGATCTGATGTGGTAAGCACGAAAATCCCGCCTTGGCGTTAATGCGGTTCATTCAAGATCGCAGGGCCGCTCTGCGGCCCTTT > 1:307786/1‑150TGCTGCTCAACAGCCATGTCGAGGAAACGGACGAAGACGACCCGTACGCGGCTTACAAGATCCCTGATGATCTGATGTGGTAAGCACGAAAATCCCGCCTTGGCGTTAATGCGGTTCATTCAAGATCGCAGGGCCGCAGAGCGGCCCTgc < 2:586407/150‑3 AACAGCCATGTCGAGGAAACGGACGAAGACGACCCGTACGCGGCTTACAAGATCCCTGATGATCTGATGTGGTAAGCACGAAAATCCCGCCTTGGCGTTAATGCGGTTCATTCAAGATCGCAGGGCCGCTCTGCGGCCCTTTCGCGACGC > 2:134742/1‑150 CAGCCATGTCGAGGAAACGGACGAAGACGACCCGTACGCGGCTTACAAGATCCCTGATGATCTGATGTGGTAAGCACGAAAATCCCGCCTTGGCGTTAATGCGGTTCATTCAAGATCGCAGGGCCGCTCTGCGGCCCTTTCGCGACccgc < 1:402134/150‑5 CGCGGCTTACAAGATCCCTGATGATCTGATGTGGTAAGCACGAAAATCCCGCCTTGGCGTTAATGCGGTTCATTCAAGATCGCAGGGCCGCTCTGCGGCCCTTTCGCGACGCAAGGCCAGCGTCTTCTAGAGAACGCGCGTGTCGCGAAA < 1:576193/150‑1 ACAAGATCCCTGATGATCTGATGTGGTAAGCACGAAAATCCCGCCTTGGCGTTAATGCGGTTCATTCAAGATCGCAGGGCCGCTCTGCGGCCCTTTCGCGACGCAAGGCCAGCGTCTTCTAGAGAACGCGCGTGTCGCGAAAGGGCCGCA < 1:134742/150‑1 CCTGATGATCTGATGTGGTAAGCACGAAAATCCCGCCTTGGCGTTAATGCGGTTCATTCAAGATCGCAGGGCCGCTCTGCGGCCCTTTCGCGACGCAAGGCCAGCGTCTTCTAGAGAACGCGCGTGTCGC < 1:445980/130‑1 CCTGATGATCTGATGTGGTAAGCACGAAAATCCCGCCTTGGCGTTAATGCGGTTCATTCAAGATCGCAGGGCCGCTCTGCGGCCCTTTCGCGACGCAAGGCCAGCGTCTTCTAGAGAACGCGCGTGTCGC < 1:445988/130‑1 CCTGATGATCTGATGTGGTAAGCACGAAAATCCCGCCTTGGCGTTAATGCGGTTCATTCAAGATCGCAGGGCCGCTCTGCGGCCCTTTCGCGACGCAAGGCCAGCGTCTTCTAGAGAACGCGCGTGTCGC > 2:445980/1‑130 CCTGATGATCTGATGTGGTAAGCACGAAAATCCCGCCTTGGCGTTAATGCGGTTCATTCAAGATCGCAGGGCCGCTCTGCGGCCCTTTCGCGACGCAAGGCCAGCGTCTTCTAGAGAACGCGCGTGTCGC > 2:445988/1‑130 TTTCGCGACGCAAGGCCAGCGTCTTCTAGAGAACGCGCGTGTCGCGAAAGGGCCGCAGAGCGGCCCTGCGATCTTGAATGAACCGCATTAACGCCAAGGCGGGATTTTCGTGCTTACCACATCAGATCATCAGGGATCTTGTAAGCCGCG > 1:406710/1‑150 GCGACGCAAGGCCAGCGTCTTCTAGAGAACGCGCGTGTCGCGAAAGGGCCGCAGAGCGGCCCTGCGATCTTGAATGAACCGCATTAACGCCAAGGCGGGATTTTCGTGCTTACCACATCAGATCATCAGGGATCTTGTAAGCCGCGTACG < 2:463243/150‑1 TGCTGCTCAACAGCCATGTCGAGGAAACGGACGAAGACGACCCGTACGCGGCTTACAAGATCCCTGATGATCTGATGTGGTAAGCACGAAAATCCCGCCTTGGCGTTAATGCGGTTCATTCAAGATCGCAGGGCCGCTCTGCGGCCCTTTCGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1859587‑1859742‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctttcgcgacGCAAGGCCAGCGTCTTCTAGAGAACGCGCGTGTCGCGAAAGGGCCGCAGAGCGGCCCTGCGATCTTGAATGAACCGCATTAACGCCAAGGCGGGATTTTCGTGCTTACCACATCAGATCATCAGGGATCTTGTAAGCCGCGTACG < NC_002947/1859773‑1859629 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |