New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4164076 = | 23 (0.850) | 7 (0.290) | 4/262 | 2.7 | 31.5% | intergenic (+31/‑178) | PP_3661/PP_3662 | membrane protein/hypothetical protein |
? | NC_002947 | 4164136 = | 10 (0.410) | intergenic (+91/‑118) | PP_3661/PP_3662 | membrane protein/hypothetical protein |
GGGTAAAACATCCTTCTTTGACACCACCATACCGAGAAATGTGGACGGCAACGAGGGGGGCTGTGAAAAACCTTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4164236‑4164076 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtaggagcgggttCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCC > NC_002947/4164136‑4164283 GGGTAAAACATCCTTCTTTGACACCACCATACCGAGAAATGTGGACGGCAACGAGGGGGGCTGTGAAAAACCTTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGT > 2:90408/1‑150 TCCTTCTTTGACACCACCATACCGAGAAATGTGGACGGCAACGAGGGGGGCTGTGAAAAACCTTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGT > 2:17347/1‑150 ACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGA > 2:365149/1‑150 TACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGCCGACTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACC > 1:510684/1‑150 ACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGCCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCC > 1:265563/1‑150 ACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGCCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCC > 1:43986/1‑150 ACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTTACCCGCGAAGCAGCCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCC > 1:497677/1‑150 AGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGC > 1:10772/1‑150 AGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGC > 1:608182/1‑150 TTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCC < 1:456997/150‑1 TTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCC < 2:125367/150‑1 GGGTAAAACATCCTTCTTTGACACCACCATACCGAGAAATGTGGACGGCAACGAGGGGGGCTGTGAAAAACCTTGAGACCGAGCTGCCTGCTTCGCGGGTGAACCCGCTCCTACAGGGGCCTTGCCGTCTTCAGGGCAGCACCCACCTGTAGGAGCGGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4164236‑4164076 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtaggagcgggttCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCC > NC_002947/4164136‑4164283 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |