New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4164076 = | 23 (0.850) | 7 (0.290) | 4/262 | 2.7 | 31.5% | intergenic (+31/‑178) | PP_3661/PP_3662 | membrane protein/hypothetical protein |
? | NC_002947 | 4164136 = | 10 (0.410) | intergenic (+91/‑118) | PP_3661/PP_3662 | membrane protein/hypothetical protein |
TTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCC > NC_002947/4163996‑4164283 | ttGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGaa < 1:166890/150‑1 (MQ=255) ttGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGaa < 1:33321/150‑1 (MQ=255) ggggggCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAgcagg < 2:45455/150‑1 (MQ=255) gggggCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGGCCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAgcaggc < 1:239406/150‑1 (MQ=255) tGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGttt < 2:298701/150‑1 (MQ=255) gCTGTTGGGCTGACTGGAGACCGAGTCGGGGTCTTGCCGGGTGAAACCGCACCAAAACGTTGGGGGTGCCCAGAAGACGGCAACGCCCCAGTATGAGCCGGTTCACCCCCCAACAAGGCACCTACGTGAAAACGTTTTTAAAAAcccccc > 2:586073/1‑150 (MQ=255) cGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACCGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTtctc < 1:186945/150‑1 (MQ=255) cGGCTGCTTCGCGGGTAAACCCGCTCCTACCGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTAt < 1:250800/150‑1 (MQ=255) ggTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAaag > 1:204053/1‑150 (MQ=255) acccgctcctacaggggccttgccgtcttcagggcagcacccacctgtaggagcgggttCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGa > 2:365149‑M2/60‑150 (MQ=255) ACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGa > 2:17347‑M1/1‑150 (MQ=255) tacaggggccttgccgtcttcagggcagcacccacctgtaggagcgggttTACCCGCGAAGCAGCCGACTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTAcc > 1:510684‑M2/51‑150 (MQ=255) acaggggccttgccgtcttcagggcagcacccacctgtaggagcgggttTACCCGCGAAGCAGCCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTAccc > 1:265563‑M2/50‑150 (MQ=255) acaggggccttgccgtcttcagggcagcacccacctgtaggagcgggttTACCCGCGAAGCAGCCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTAccc > 1:43986‑M2/50‑150 (MQ=255) acaggggccttgccgtcttcagggcagcacccacctgtaggagcgggttTACCCGCGAAGCAGCCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTAccc > 1:497677‑M2/50‑150 (MQ=255) ACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTAccc > 2:90408‑M1/1‑150 (MQ=255) aggggccttgccgtcttcagggcagcacccacctgtaggagcgggttCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGc > 1:608182‑M2/48‑150 (MQ=255) aggggccttgccgtcttcagggcagcacccacctgtaggagcgggttCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGc > 1:10772‑M2/48‑150 (MQ=255) gctgcCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGaaa < 1:427607/150‑1 (MQ=255) ttCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATcc < 2:125367‑M2/148‑1 (MQ=255) ttCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATcc < 1:456997‑M2/148‑1 (MQ=255) | TTGGCGGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCCCCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCC > NC_002947/4163996‑4164283 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |