| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 139996 = | 12 (0.720) | 3 (0.190) | 3/276 | 1.8 | 21.0% | coding (508/1782 nt) | kinB | alginate biosynthesis sensor protein KinB |
| ? | NC_002947 | 140016 = | 11 (0.680) | coding (488/1782 nt) | kinB | alginate biosynthesis sensor protein KinB | |||||
GCCACACCCGCTCGCAGCATGGGTGTCGATCAGCCTCTTGGGGCCGCGTTCAATCAGGTGCGCACCGACCTCATCGATTCCCACAAGCAGGCATTGGACCTGATTACCCGTAGCGAGGAACGCACCCGTGACCGCGCATTGCTGGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/140143‑139996‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcaCGGGTGCGTTCCTCGCTACGGGTAATCAGGTCCAATGCCTGCTTGTGGGAATCGATGAGGTCGGTGCGCACCTGATTGAACGCGGCCCCAAGAGGCTGATCGACACCCATGCTGCGAGC > NC_002947/140016‑140134 GCCACACCCGCTCGCAGCATGGGTGTCGATCAGCCTCTTGGGGCCGCGTTCAATCAGGTGCGCACCGACCTCATCGATTCCCACAAGCAGGCATTGGACCTGATTACCCGTAGCGAGGAACGCACCCGTGACCGCGCATTGCTGGTCgcc < 2:139672/150‑4GCCACACCCGCTCGCAGCATGGGTGTCGATCAGCCTCTTGGGGCCGCGTTCAATCAGGTGCGCACCGACCTCATCGATTCCCACAAGCAGGCATTGGACCTGATTACCCGTAGCGAGGAACGCACCCGTGACCGCGCATTGCTGGTCgcc < 2:67069/150‑4 GAGGAACGCACCCGTGACCGCGCATTGCTGGTCACGGGTGCGTTCCTCGCTACGGGTAATCAGGTCCAATGCCTGCTTGTGGGAATCGATGAGGTCGGTGCGCACCTGATTGAACGCGGCCCCAAGAGGCTGATCGACACCCAT > 1:373759/1‑144 GAGGAACGCACCCGTGACCGCGCATTGCTGGTCACGGGTGCGTTCCTCGCTACGGGTAATCAGGTCCAATGCCTGCTTGTGGGAATCGATGAGGTCGGTGCGCACCTGATTGAACGCGGCCCCAAGAGGCTGATCGACACCCAT < 2:373759/144‑1 GAACGCACCCGTGACCGCGCATTGCTGGTCAGTGGTGCGTTCCTCGCTACGGGTAATCAGGTCCAATGCCTGCTTGTGGGAATCGATGAGGTCGGTGCGCACCTGATTGAACGCGGCCCCAAGAGGCTGATCGACACCCATGCTGCGAGC > 1:33661/1‑150 GCCACACCCGCTCGCAGCATGGGTGTCGATCAGCCTCTTGGGGCCGCGTTCAATCAGGTGCGCACCGACCTCATCGATTCCCACAAGCAGGCATTGGACCTGATTACCCGTAGCGAGGAACGCACCCGTGACCGCGCATTGCTGGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/140143‑139996‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcaCGGGTGCGTTCCTCGCTACGGGTAATCAGGTCCAATGCCTGCTTGTGGGAATCGATGAGGTCGGTGCGCACCTGATTGAACGCGGCCCCAAGAGGCTGATCGACACCCATGCTGCGAGC > NC_002947/140016‑140134 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |