New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1076410 =	13 (0.780)	3 (0.190)	3/274	1.8	21.9%	intergenic (+4/‑217)	mreB/mreC	cell wall structural actin‑like protein MreB/cell shape‑determining protein MreC
	?	NC_002947	1076429 =	9 (0.560)					intergenic (+23/‑198)	mreB/mreC	cell wall structural actin‑like protein MreB/cell shape‑determining protein MreC

TGGACGACTCAGGAGGTCATTGGACATGGAACAACGCACCAGCCTGGTTGCGGGTTGACGGATACGGCGCCCCAAACGGGCGCCAGCCCAGCGCATACAGGTAGCACTGTACGTACTACCTGTAAACCGGGCGCTCGTGAACAGCGAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1076559‑1076410 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgagcgCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGTATGCGCTGGGCTGGCGCCCGTTTGGGGCGCCGTATCCGTCAACCCGCAACCAGGCTGGTGCGTTGTTCCATGTCCAATGACCTCCTGAGTCGTCC  >  NC_002947/1076429‑1076558                                                                                                                                                                                                                                                                                          TGGACGACTCAGGAGGTCATTGGACATGGAACAACGCACCAGCCTGGTTGCGGGTTGACGGATACGGCGCCCCAAACGGGCGCCAGCCCAGCGCATACAGGTAGCACTGTACGTACTACCTGTAAACCGGGCGCTCGTGAACAGCGAGCG                                                                                                                                    <  1:46671/150‑1                                                                                                                             AACCGGGCGCTCGTGAACAGCGAGCGCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGTATGCGCTGGGCTGGCGCCCGTTT                                                                          >  1:69510/1‑84                                                                                                                             AACCGGGCGCTCGTGAACAGCGAGCGCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGTATGCGCTGGGCTGGCGCCCGTTT                                                                          <  2:69510/84‑1                                                                                                                                   GCGCTCGTGAACAGCGAGCGCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGTATGCGCTGGGCTGGCGCCCGTTTGGGGCGCCGTATCCGTCAACCCGCAACCAGGCTGGTGCGTTGTTCCATGTCCAATGACCTCCTGAGTCGTCC  >  1:244751/1‑150                                                                                                                                                                                                                                                                                          TGGACGACTCAGGAGGTCATTGGACATGGAACAACGCACCAGCCTGGTTGCGGGTTGACGGATACGGCGCCCCAAACGGGCGCCAGCCCAGCGCATACAGGTAGCACTGTACGTACTACCTGTAAACCGGGCGCTCGTGAACAGCGAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1076559‑1076410 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgagcgCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGTATGCGCTGGGCTGGCGCCCGTTTGGGGCGCCGTATCCGTCAACCCGCAACCAGGCTGGTGCGTTGTTCCATGTCCAATGACCTCCTGAGTCGTCC  >  NC_002947/1076429‑1076558

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.