| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1076410 = | 13 (0.780) | 3 (0.190) | 3/274 | 1.8 | 21.9% | intergenic (+4/‑217) | mreB/mreC | cell wall structural actin‑like protein MreB/cell shape‑determining protein MreC |
| ? | NC_002947 | 1076429 = | 9 (0.560) | intergenic (+23/‑198) | mreB/mreC | cell wall structural actin‑like protein MreB/cell shape‑determining protein MreC | |||||
GCTGGCCCAGGAAACCGGCCTGCCGGTGATTGTCGCCGAGGACCCGCTGACCTGCGTCGCCCGTGGCGGCGGTCGCGCCCTGGAGATGATGGACAAGCACGCGATGGACCTGCTCTCCAGCGAGTGATCCCGCTCGCTGTTCACGAGCGCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGTATGCGCTGGGCTGGCGCCCGTTTGGGGCGCCGTATCCGTCAACCCGCAACCAGGCTGGTGCGTTGTTCCATGTCCAATGACCTCCTGAGTCGTCCA > NC_002947/1076280‑1076559 | ggacgactcaggaggtcattggacatggaacaacgcaccagcctggttgcgggttgacggatacggcgccccaaacgggcgccagcccagcgcatacaggtagcactgtacgtactacctgtaaaccgggCGCTCGCTGTTCACGAgcgc > 1:244751‑M1/131‑150 (MQ=255) cGGCCTGCCGGTGATTGTCGCCGAGGACCCGCTGACCTGCGTCGCCCGTGGCGGCGGTCGCGCCCTGGAGATGATGGACAAGCACGCGATGGACCTGCTCTCCAGCGAGTGATCCCGCTCGCTGTTCACGAGCGCCCGGTTTACAGgtag < 2:165789/150‑1 (MQ=255) gCCGAGGACCCGCTGACCTGCGTCGCCCGTGGCGGCGGTCGCGCCCTGGAGATGATGGACAAGCACGCGATGGACCTGCTCTCCAGCGAGTGATCCCGCTCGCTGTTCACGAGCGCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGt < 2:201946/150‑1 (MQ=255) ccGTGGCGGCGGTCGCGCCCTGGAGATGATGGACAAGCACGCGATGGACCTGCTCTCCAGCGAGTGATCCCGCTCGCTGTTCACGAGCGCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGTATGCGCTGGGCTGGCGCCCGTTTggg < 2:6660/150‑1 (MQ=255) aaacgggcgccagcccagcgcatacaggtagcactgtacgtactacctgtaaaccgggCGCTCGCTGTTCACGAGCGCCCGGtt > 1:69510‑M1/59‑84 (MQ=255) aaacgggcgccagcccagcgcatacaggtagcactgtacgtactacctgtaaaccgggCGCTCGCTGTTCACGAGCGCCCGGtt < 2:69510‑M1/26‑1 (MQ=255) ggAGTTGATGGACAAGCACGCGATGGACCTGCTCTCCAGCGAGTGATCCCGCTCGCTGTTCACGAGCGGGCGGTTTACAGGTAGTACGTACAGTGGTAGCTGTATGCGCTGGGCTGGCGCCCGTTTGGGGCGCCGTATCCGTCAACCCGc > 2:145144/1‑150 (MQ=255) ggAGATGATGGACAAGCACGCGATGGACCTGCTCTCCAGCGAGTGATCCCGCTCGCTGTTCACGAGCGCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGTATGCGCTGGGCTGGCGCCCGTTTGGGGCGCCGTATCCGTCAACCCGc > 2:186483/1‑150 (MQ=255) cTGCTCTCCAGCGAGTGATCCCGCTCGCTGTTCACGAGCGCCCGGTTTACAGGTAGTACGTACAGTGCTa > 1:71118/1‑70 (MQ=255) cTGCTCTCCAGCGAGTGATCCCGCTCGCTGTTCACGAGCGCCCGGTTTACAGGTAGTACGTACAGTGCTa < 2:71118/70‑1 (MQ=255) aaccgggcgctcgtgaacagcgagcgCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGTATGCGCTGGGCTGGCGCCCGttt > 1:69510‑M2/27‑84 (MQ=255) aaccgggcgctcgtgaacagcgagcgCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGTATGCGCTGGGCTGGCGCCCGttt < 2:69510‑M2/58‑1 (MQ=255) aTCCCGCTCGCTGTTCACGAGCGCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGTATGCGCTGGGCTGGCGCCCGTTTGGGGCGCCGTATCCGTCAACCCGCAACCAGGCTGGTGCGTTGTTCCATGTc < 1:194616/132‑1 (MQ=255) aTCCCGCTCGCTGTTCACGAGCGCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGTATGCGCTGGGCTGGCGCCCGTTTGGGGCGCCGTATCCGTCAACCCGCAACCAGGCTGGTGCGTTGTTCCATGTc > 2:194616/1‑132 (MQ=255) gcgctcgtgaacagcgagcgCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGTATGCGCTGGGCTGGCGCCCGTTTGGGGCGCCGTATCCGTCAACCCGCAACCAGGCTGGTGCGTTGTTCCATGTCCAATGACCTCCTGAGTCGTcc > 1:244751‑M2/21‑150 (MQ=255) CGCTCGCTGTTCACGAGCGCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGTATGCGCTGGGCTGGCGCCCGTTTGGGGCGCCGTATCCGTCAACCCGCAACCAGGCTGGTGCGTTGTTCCATGTCCAATGACCTCCTGAGTCGTCCa < 1:46671‑M1/150‑1 (MQ=255) | GCTGGCCCAGGAAACCGGCCTGCCGGTGATTGTCGCCGAGGACCCGCTGACCTGCGTCGCCCGTGGCGGCGGTCGCGCCCTGGAGATGATGGACAAGCACGCGATGGACCTGCTCTCCAGCGAGTGATCCCGCTCGCTGTTCACGAGCGCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGTATGCGCTGGGCTGGCGCCCGTTTGGGGCGCCGTATCCGTCAACCCGCAACCAGGCTGGTGCGTTGTTCCATGTCCAATGACCTCCTGAGTCGTCCA > NC_002947/1076280‑1076559 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |