New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1076410 =	13 (0.780)	3 (0.190)	3/274	1.8	21.9%	intergenic (+4/‑217)	mreB/mreC	cell wall structural actin‑like protein MreB/cell shape‑determining protein MreC
	?	NC_002947	1076429 =	9 (0.560)					intergenic (+23/‑198)	mreB/mreC	cell wall structural actin‑like protein MreB/cell shape‑determining protein MreC

TGACCTCGACAAACTGCTGGCCCAGGAAACCGGCCTGCCGGTGATTGTCGCCGAGGACCCGCTGACCTGCGTCGCCCGTGGCGGCGGTCGCGCCCTGGAGATGATGGACAAGCACGCGATGGACCTGCTCTCCAGCGAGTGATCCCGCTCGCTGTTCACGAGCGCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGTATGCGCTGGGCTGGCGCCCGTTTGGGGCGCCGTATCCGTCAACCCGCAACCAGGCTGGTGCGTTGTTCCATGTCCAATGACCTCCTGAGTCGTCCA  >  NC_002947/1076265‑1076559                                                                                                                                                  |                                                                                                                                                      tGACCTCGACAAACTGCTGGCCCAGGAAACCGGCCTGCCGGTGATTGTCGCCGAGGACCCGCTGACCTGCGTCGCCCGTGGCGGCGGTCGCGCCCTGGAGATGATGGACAAGCACGCGATGGACCTGCTCTCCAGCGAGTGATCCcgctc                                                                                                                                                   <  1:178911/150‑1 (MQ=255)   aCCTCGACAAACTGCTGGCCCAGGAAACCGGCCTGCCGGTGATTGTCGCCGAGGACCCGCTGACCTGCGTCGCCCGTGGCGGCGGTCGCGCCCTGGAGATGATGGACAAGCACGCGATGGACCTGCTCTCCAGCGAGTGATCCcgctcgc                                                                                                                                                 <  1:357163/150‑1 (MQ=255)    ccTCGACAAACTGCTGGCCCAGGAAACCGGCCTGCCGGTGATTGTCGCCGAGGACCCGCTGACCTGCGTCGCCCGTGGCGGCGGTCGCGCCCTGGAGATGATGGACAAGCACGCGATGGACCTGCTCTCCAGCGAGTGATCCcgctcgct                                                                                                                                                >  1:188933/1‑150 (MQ=255)            aaCTGCTGGCCCAGGAAACCGGCCTGCCGGTGATTGTCGCCGAGGACCCGCTGACCTGCGTCGCCCGTGGCGGCGGTCGCGCCCTGGAGATGATGGACAAGCACGCGATGGACCTGCTCTCCAGCGAGTGATCCCGCTCGCTGTTCACGa                                                                                                                                        <  1:232842/150‑1 (MQ=255)                ggacgactcaggaggtcattggacatggaacaacgcaccagcctggttgcgggttgacggatacggcgccccaaacgggcgccagcccagcgcatacaggtagcactgtacgtactacctgtaaaccgggCGCTCGCTGTTCACGAgcgc                                                                                                                                    >  1:244751‑M1/131‑150 (MQ=255)                               cGGCCTGCCGGTGATTGTCGCCGAGGACCCGCTGACCTGCGTCGCCCGTGGCGGCGGTCGCGCCCTGGAGATGATGGACAAGCACGCGATGGACCTGCTCTCCAGCGAGTGATCCCGCTCGCTGTTCACGAGCGCCCGGTTTACAGgtag                                                                                                                     <  2:165789/150‑1 (MQ=255)                                                  gCCGAGGACCCGCTGACCTGCGTCGCCCGTGGCGGCGGTCGCGCCCTGGAGATGATGGACAAGCACGCGATGGACCTGCTCTCCAGCGAGTGATCCCGCTCGCTGTTCACGAGCGCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGt                                                                                                  <  2:201946/150‑1 (MQ=255)                                                                            ccGTGGCGGCGGTCGCGCCCTGGAGATGATGGACAAGCACGCGATGGACCTGCTCTCCAGCGAGTGATCCCGCTCGCTGTTCACGAGCGCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGTATGCGCTGGGCTGGCGCCCGTTTggg                                                                        <  2:6660/150‑1 (MQ=255)                                                                                        aaacgggcgccagcccagcgcatacaggtagcactgtacgtactacctgtaaaccgggCGCTCGCTGTTCACGAGCGCCCGGtt                                                                                                                              <  2:69510‑M1/26‑1 (MQ=255)                                                                                        aaacgggcgccagcccagcgcatacaggtagcactgtacgtactacctgtaaaccgggCGCTCGCTGTTCACGAGCGCCCGGtt                                                                                                                              >  1:69510‑M1/59‑84 (MQ=255)                                                                                                 ggAGTTGATGGACAAGCACGCGATGGACCTGCTCTCCAGCGAGTGATCCCGCTCGCTGTTCACGAGCGGGCGGTTTACAGGTAGTACGTACAGTGGTAGCTGTATGCGCTGGGCTGGCGCCCGTTTGGGGCGCCGTATCCGTCAACCCGc                                                   >  2:145144/1‑150 (MQ=255)                                                                                                 ggAGATGATGGACAAGCACGCGATGGACCTGCTCTCCAGCGAGTGATCCCGCTCGCTGTTCACGAGCGCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGTATGCGCTGGGCTGGCGCCCGTTTGGGGCGCCGTATCCGTCAACCCGc                                                   >  2:186483/1‑150 (MQ=255)                                                                                                                             cTGCTCTCCAGCGAGTGATCCCGCTCGCTGTTCACGAGCGCCCGGTTTACAGGTAGTACGTACAGTGCTa                                                                                                       <  2:71118/70‑1 (MQ=255)                                                                                                                             cTGCTCTCCAGCGAGTGATCCCGCTCGCTGTTCACGAGCGCCCGGTTTACAGGTAGTACGTACAGTGCTa                                                                                                       >  1:71118/1‑70 (MQ=255)                                                                                                                                              aTCCCGCTCGCTGTTCACGAGCGCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGTATGCGCTGGGCTGGCGCCCGTTTGGGGCGCCGTATCCGTCAACCCGCAACCAGGCTGGTGCGTTGTTCCATGTc                        >  2:194616/1‑132 (MQ=255)                                                                                                                                              aTCCCGCTCGCTGTTCACGAGCGCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGTATGCGCTGGGCTGGCGCCCGTTTGGGGCGCCGTATCCGTCAACCCGCAACCAGGCTGGTGCGTTGTTCCATGTc                        <  1:194616/132‑1 (MQ=255)                                                                                                                                                  CGCTCGCTGTTCACGAGCGCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGTATGCGCTGGGCTGGCGCCCGTTTGGGGCGCCGTATCCGTCAACCCGCAACCAGGCTGGTGCGTTGTTCCATGTCCAATGACCTCCTGAGTCGTCCa  <  1:46671‑M1/150‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                      TGACCTCGACAAACTGCTGGCCCAGGAAACCGGCCTGCCGGTGATTGTCGCCGAGGACCCGCTGACCTGCGTCGCCCGTGGCGGCGGTCGCGCCCTGGAGATGATGGACAAGCACGCGATGGACCTGCTCTCCAGCGAGTGATCCCGCTCGCTGTTCACGAGCGCCCGGTTTACAGGTAGTACGTACAGTGCTACCTGTATGCGCTGGGCTGGCGCCCGTTTGGGGCGCCGTATCCGTCAACCCGCAACCAGGCTGGTGCGTTGTTCCATGTCCAATGACCTCCTGAGTCGTCCA  >  NC_002947/1076265‑1076559

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.