New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1762884 =14 (0.840)3 (0.190) 3/276 1.8 20.3% coding (476/477 nt) PP_1569 hypothetical protein
?NC_002947 1762915 = 10 (0.620)coding (31/342 nt) PP_1570 head‑tail adaptor

GATGCGGTGCCGCAGCCTGCCGGCCTGCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1762914‑1762884
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatcGACATCCAGGAGTTGAGGCCGGTGCGTGACCCGGTGACACTGGAGTTCGGTGAGCCTGAATGGGTCACTCGCTGGGAGAAATGCCCAGCCAGTGTCGAAGACCTGTCGGCCAGGGACTT  >  NC_002947/1762915‑1763033
                                                                                                                                                      
GATGCGGTGCCGCAGCCTGCCGGCCTGCATCGACATCCAGGAGTTGAGGCCGGTGCGTGACCCGGTGACACTGGAGTTCGGTGAGCCTGAATGGGTCACTCGCTGGGAGAAATGCCCAGCCAGTGTCGAAGACCTGTCGGCCAGGGACTT  >  2:67424/1‑150
 ATGCGGTGCCGCAGCCTGCCGGCCTGCATCGACATCCAGGAGTTGAGGCCGGTGCGTGACCCGGTGACACTGGAGTTCGGTGAGCCTGAATGGGT                                                        <  1:120914/95‑1
 ATGCGGTGCCGCAGCCTGCCGGCCTGCATCGACATCCAGGAGTTGAGGCCGGTGCGTGACCCGGTGACACTGGAGTTCGGTGAGCCTGAATGGGT                                                        >  2:120914/1‑95
                                                                                                                                                      
GATGCGGTGCCGCAGCCTGCCGGCCTGCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1762914‑1762884
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatcGACATCCAGGAGTTGAGGCCGGTGCGTGACCCGGTGACACTGGAGTTCGGTGAGCCTGAATGGGTCACTCGCTGGGAGAAATGCCCAGCCAGTGTCGAAGACCTGTCGGCCAGGGACTT  >  NC_002947/1762915‑1763033

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.