| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1811061 = | 14 (0.840) | 3 (0.190) | 3/270 | 1.8 | 22.1% | coding (334/708 nt) | ispD | 2‑C‑methyl‑D‑erythritol 4‑phosphate cytidylyltransferase |
| ? | NC_002947 | 1811088 = | 8 (0.510) | coding (361/708 nt) | ispD | 2‑C‑methyl‑D‑erythritol 4‑phosphate cytidylyltransferase | |||||
AGGTCGCTGCGCGCCAGGTTCGGCCGCGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1811092‑1811061‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcagcGACCTGGACAAGCTGTTGTCGGAGCTGGCGGACGACCCGGTGGGTGGCCTGCTGGCGGTGCCGGCGCGCGACACCCTCAAGCGTGCCGACAGCCATGGCCGGGTGAGTGCTACCGTGGACCGCA > NC_002947/1811088‑1811211 AGGTCGCTGCGCGCCAGGTTCGGCCGCGCAGCGACCTGGACAAGCTGTTGTCGGAGCTGGCGGACGACCCGGTGGGTGGCCTGCTGGC < 1:191753/88‑1AGGTCGCTGCGCGCCAGGTTCGGCCGCGCAGCGACCTGGACAAGCTGTTGTCGGAGCTGGCGGACGACCCGGTGGGTGGCCTGCTGGC > 2:191753/1‑88 CTGCGCGCCAGGTTCGGCCGCGCAGCGACCTGGACAAGCTGTTGTCGGAGCTGGCGGACGACCCGGTGGGTGGCCTGCTGGCGGTGCCGGCGCGCGACACCCTCAAGCGTGCCGACAGCCATGGCCGGGTGAGTGCTACCGTGGACCGCA > 2:230510/1‑150 AGGTCGCTGCGCGCCAGGTTCGGCCGCGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1811092‑1811061‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcagcGACCTGGACAAGCTGTTGTCGGAGCTGGCGGACGACCCGGTGGGTGGCCTGCTGGCGGTGCCGGCGCGCGACACCCTCAAGCGTGCCGACAGCCATGGCCGGGTGAGTGCTACCGTGGACCGCA > NC_002947/1811088‑1811211 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |