New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2685412	9 (0.540)	3 (0.190)	3/272	1.8	24.4%	coding (1118/1128 nt)	PP_2352	hypothetical protein
	?	NC_002947	= 2685422	10 (0.630)					coding (1108/1128 nt)	PP_2352	hypothetical protein

GGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2685265‑2685412 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggcaaCTGCACCAGATTGCCC  <  NC_002947/2685422‑2685407                                                                                                                                                                      GGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCcaat                <  2:385033/150‑5               GGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAACTGCACCAGATTGCCC  <  2:5341/150‑1                                                                                                AGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAACTGCACCAGATTGCC   <  1:168097/68‑1                                                                                                AGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAACTGCACCAGATTGCC   >  2:168097/1‑68                                                                                                                                                                      GGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2685265‑2685412 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggcaaCTGCACCAGATTGCCC  <  NC_002947/2685422‑2685407

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.