New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2685412	9 (0.540)	3 (0.190)	3/272	1.8	24.4%	coding (1118/1128 nt)	PP_2352	hypothetical protein
	?	NC_002947	= 2685422	10 (0.630)					coding (1108/1128 nt)	PP_2352	hypothetical protein

GTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCGGCTGCGGGTACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGCGGACGTTTACCTATGACAATCACCCGTCGATCCTGGTCATACAGCACATCCACCAGGTTGACGAAACGCTGCTGAG  >  NC_002947/2685285‑2685562                                                                                                                                          |                                                                                                                                             gTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCg                                                                                                                                  >  2:270441/1‑150 (MQ=255)                tCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCGGCTGCGGGTACGCAt                                                                                                                   >  1:107370/1‑150 (MQ=255)                                                           agagGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCGGCTGCGGGTACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGCGGACGt                                                                        >  1:88359/1‑150 (MQ=255)                                                              ggCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCGGCTGCGGGTACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGCGGACGTTTa                                                                     <  1:368288/150‑1 (MQ=255)                                                                     gtgtAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCGGCTGCGGGTACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGCGGACGTTTACCTATGa                                                              <  2:88359/150‑1 (MQ=255)                                                                                      cccGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCGGCTGCGGGTACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGCGGACGTTTACCTATGACAATCACCCGTCGATcc                                             <  1:104024/150‑1 (MQ=255)                                                                                        cgcgAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCGGCTGCGGGTACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGCGGACGTTTACCTATGACAATCACCCGTCGATCCTg                                           <  1:110541/150‑1 (MQ=255)                                                                                                                         gggggCAATCTGGTGCAGTTGCCCCAACCGGCTGCGGGTACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGCGGACGTTTACCTAt                                                                <  1:205784/96‑1 (MQ=255)                                                                                                                         gggggCAATCTGGTGCAGTTGCCCCAACCGGCTGCGGGTACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGCGGACGTTTACCTAt                                                                >  2:205784/1‑96 (MQ=255)                                                                                                                           gggCAATCTGGTGCAGttgccccctgagcctgcagtgcctgagatggccctttcgcgggtaaacccgctcctacacgacggcctctgccgaaccaccgatgcgcgtgccgcccgcgaaagggccatcgaggtcaaaccatcaacccgccc        <  2:5341‑M2/150‑135 (MQ=255)                                                                                                                            ggCAATCTGGTGCAGttgccccctgagcctgcagtgcctgagatggccctttcgcgggtaaacccgct                                                                                         <  1:168097‑M2/68‑54 (MQ=255)                                                                                                                            ggCAATCTGGTGCAGttgccccctgagcctgcagtgcctgagatggccctttcgcgggtaaacccgct                                                                                         >  2:168097‑M2/1‑15 (MQ=255)                                                                                                                                 tCTGGTGCAGTTGCCCCAACCGGCTGCGGGTACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGCGGACGTTTACCTATGACAATCACCCGTCGATCCTGGTCATACAGCACATCCACCAGGTTGACGAAACGCTGCTGAg  <  1:25243/150‑1 (MQ=255)                                                                                                                                          |                                                                                                                                             GTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAATCTGGTGCAGTTGCCCCAACCGGCTGCGGGTACGCATCAGGTCGGCCAGCGGGCCGCCCAGGCTCTCTTCCAGCGGACGTTTACCTATGACAATCACCCGTCGATCCTGGTCATACAGCACATCCACCAGGTTGACGAAACGCTGCTGAG  >  NC_002947/2685285‑2685562

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.