New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2973193	12 (0.720)	3 (0.190)	3/272	1.8	21.1%	coding (1567/2391 nt)	PP_2599	chemotaxis sensory transducer family protein
	?	NC_002947	= 2973206	11 (0.690)					coding (1580/2391 nt)	PP_2599	chemotaxis sensory transducer family protein

GTGGACAAGGCGACCAAGCTGGAGACCCTGTACAACCGCATCCACGAAGTACGCATGCGTTTCGAAGTGCTGTGGCGCGATGCGGAGCTGGCTTATTGGCAAGGCCTGGCCAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2973043‑2973193 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcagcTCGGCCTGGCTTCGCTGCAGTGC  <  NC_002947/2973206‑2973184                                                                                                                                                                                GTGGACAAGGCGACCAAGCTGGAGACCCTGTACAACCGCATCCACGAAGTACGCATGCGTTTCGAAGTGCTGTGGCGCGATGCGGAGCTGGCTTATTGGCAAGGCCTGGCCAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAG                          >  1:226441/1‑150                      GAGACCCTGTACAACCGCATCCACGAAGTACGCATGCGTTTCGAAGTGCTGTGGCGCGATGCGGAGCTGGCTTATTGGCAAGGCCTGGCCAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGCTCGGCCTGGCTTCGCTGCAG     <  2:114848/150‑1                                                                                                               CAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGCTCGGCCTGGCTTCGCTGCAGTGC  >  1:37754/1‑64                                                                                                               CAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGCTCGGCCTGGCTTCGCTGCAGTGC  <  2:37754/64‑1                                                                                                                                                                                GTGGACAAGGCGACCAAGCTGGAGACCCTGTACAACCGCATCCACGAAGTACGCATGCGTTTCGAAGTGCTGTGGCGCGATGCGGAGCTGGCTTATTGGCAAGGCCTGGCCAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2973043‑2973193 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcagcTCGGCCTGGCTTCGCTGCAGTGC  <  NC_002947/2973206‑2973184

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.