New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2973193	12 (0.720)	3 (0.190)	3/272	1.8	21.1%	coding (1567/2391 nt)	PP_2599	chemotaxis sensory transducer family protein
	?	NC_002947	= 2973206	11 (0.690)					coding (1580/2391 nt)	PP_2599	chemotaxis sensory transducer family protein

GCGACCAAGCTGGAGACCCTGTACAACCGCATCCACGAAGTACGCATGCGTTTCGAAGTGCTGTGGCGCGATGCGGAGCTGGCTTATTGGCAAGGCCTGGCCAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGCGAAGCCAGGCCGAGCTGCAGGACGACTTCGCTTTCGTCGCCCAGGCCAACATCGGCGGCGAGTTCATGCAGGACACCGATATCCAGCGCTTGCAGGTGATCGGCAAGCGACGCTGGCTGCGCCATTTCGATAACCGCCTGGGC  >  NC_002947/2973052‑2973336                                                                                                                                              |                                                                                                                                                gCGACCAAGCTGGAGACCCTGTACAACCGCATCCACGAAGTACGCATGCGTTTCGAAGTGCTGTGGCGCGATGCGGAGCTGGCTTATTGGCAAGGCCTGGCCAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGCGAAGCCAg                                                                                                                                         <  2:142642/150‑1 (MQ=255)    aCCAAGCTGGAGACCCTGTACAACCGCATCCACGAAGTACGCATGCGTTTCGAAGTGCTGTGGCGCGATGCGGAGCTGGCTTATTGGCAAGGCCTGGCCAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGCGAAGCCAGGcc                                                                                                                                      <  1:166345/150‑1 (MQ=255)             gagaCCCTGTACAACCGCATCCACGAAGTACGCATGCGTTTCGAAGTGCTGTGGCGCGATGCGGAGCTGGCTTATTGGCAAGGCCTGGCCAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGCtcggcctggcttcgctgcag                                                                                                                             <  2:114848‑M1/150‑21 (MQ=255)                    tGTACAACCGCATCCACGAAGTACGCATGCGTTTCGAAGTGCTGTGGCGCGATGCGGAGCTGGCTTATTGGCAAGGCCTGGCCAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGCGAAGCCAGGCCGAGCTGCAGGACGACt                                                                                                                      <  2:140169/150‑1 (MQ=255)                               aTCCACGAAGTACGCATGCGTTTCGAAGTGCTGTGGCGCGATGCGGAGCTGGCTTATTGGCAAGGCCTGGCCAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGCGAAGCCAGGCCGAGCTGCAGGACGACTTCGCTTtcgtc                                                                                                           <  1:78816/150‑1 (MQ=255)                                        gTACGCATGCGTTTCGAAGTGCTGTGGCGCGATGCGGAGCTGGCTTATTGGCAAGGCCTGGCCAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGCGAAGCCAGGCCGAGCTGCAGGACGACTTCGCTTTCGTCGCCCAGGcc                                                                                                  >  1:28667/1‑150 (MQ=255)                                                  gTTTCGAAGTGCTGTGGCGCGATGCGGAGCTGGCTTATTGGCAAGGCCTGGCCAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGCGAAGCCAGGCCGAGCTGCAGGACGACTTCGCTTTCGTCGCCCAGGCCAACATcggcg                                                                                        >  1:235307/1‑150 (MQ=255)                                                                       aTGCGGAGCTGGCTTATTGGCAAGGCCTGGCCAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGCGAAGCCAGGCCGAGCTGCAGGACGACTTCGCTTTCGTCGCCCAGGCCAACATCGGCGGCGAGTTCATGCAGGACACCg                                                                   <  2:101827/150‑1 (MQ=255)                                                                              gCTGGCTTATTGGCAAGGCCTGGCCAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGCGAAGCCAGGCCGAGCTGCAGGACGACTTCGCTTTCGTCGCCCAGGCCAACATCGGCGGCGAGTTCATGCAGGACACCGATATCCa                                                            <  2:380461/150‑1 (MQ=255)                                                                                          gCAAGGCCTGGCCAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGCGAAGCCAGGCCGAGCTGCAGGACGACTTCGCTTTCGTCGCCCAGGCCAACATCGGCGGCGAGTTCATGCAGGACACCGATATCCAGCGCTTGCAGGt                                                >  1:40255/1‑150 (MQ=255)                                                                                               gCCTGGCCAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGCGAAGCCAGGCCGAGCTGCAGGACGACTTCGCTTTCGTCGCCCAGGCCAACATCGGCGGCGAGTTCATGCAGGACACCGATATCCAGCGCTTGCAGGTTATCg                                           >  2:177546/1‑150 (MQ=255)                                                                                                      cAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGCtcggcctggcttcgctgcagtgc                                                                                                                          <  2:37754‑M1/64‑24 (MQ=255)                                                                                                      cAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGCtcggcctggcttcgctgcagtgc                                                                                                                          >  1:37754‑M1/1‑41 (MQ=255)                                                                                                                                   ccGCACTGCAGCGAAGCCAGGCCGAGCTGCAGGACGACTTCGCTTTCGTCGCCCAGGCCAACATCGGCGGCGAGTTCATGCAGGACACCGATATCCAGCGCTTGCAGGTGATCGGCAAGCGACGCTGGCTGCGCCATTTCGATAACCGcc       >  2:209441/1‑150 (MQ=255)                                                                                                                                     gCACTGCAGCGAAGCCAGGCCGAgctgcagtgcggctttcagtacctgctggtcgacgccgctg                                                                                           >  1:37754‑M2/1‑23 (MQ=255)                                                                                                                                     gCACTGCAGCGAAGCCAGGCCGAgctgcagtgcggctttcagtacctgctggtcgacgccgctg                                                                                           <  2:37754‑M2/64‑42 (MQ=255)                                                                                                                                      cACTGCAGCGAAGCCAGGCCGAGCTGCAGGACGACTTCGCTTTCGTCGCCCAGGCCAACATCGGCGGCGAGTTCATGCAGGACACCGATATCCAGCGCTTGCAGGTGATCGGCAAGCGACGCTGGCTGCGCCATTTCGATAACCGCCTgg    <  2:235307/150‑1 (MQ=255)                                                                                                                                        cTGCAGCGAAGCCAGGCCGAgctgcagtgcggctttcagtacctgctggtcgacgccgctggccaggccttgccaataagccagctccgcatcgcgccacagcacttcgaaacgcatgcgtacttcgtggatgcggttgtacagggtctc  <  2:114848‑M2/150‑131 (MQ=255)                                                                                                                                              |                                                                                                                                                GCGACCAAGCTGGAGACCCTGTACAACCGCATCCACGAAGTACGCATGCGTTTCGAAGTGCTGTGGCGCGATGCGGAGCTGGCTTATTGGCAAGGCCTGGCCAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGCGAAGCCAGGCCGAGCTGCAGGACGACTTCGCTTTCGTCGCCCAGGCCAACATCGGCGGCGAGTTCATGCAGGACACCGATATCCAGCGCTTGCAGGTGATCGGCAAGCGACGCTGGCTGCGCCATTTCGATAACCGCCTGGGC  >  NC_002947/2973052‑2973336

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.