New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4132612 =20 (1.200)5 (0.300) 4/284 1.6 24.5% coding (245/687 nt) PP_3634 GNAT family acetyltransferase
?NC_002947 4132646 = 11 (0.660)coding (279/687 nt) PP_3634 GNAT family acetyltransferase

CCCATCGTCCTGGGCTGGCAGCGACAGCGCAAAGCCCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4132652‑4132612
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCGATGGGCAGGCCTGTGCATTGGCCTTTCTGGCCGTGTGCGCCAGCCATCGCCGCCAGGGCATCGCCCGTGCCCTGCTGGGCGACCTGCGCTCACGCCATGCCTGCGTGGAGCTGAACGCCTTTGC  >  NC_002947/4132646‑4132771
                                                                                                                                                                       
CCCATCGTCCTGGGCTGGCAGCGACAGCGCAAAGCCCAGCACGATGGGCAGGCCTGTGCATTGGCCTTTCTGGCCGTGTGCGCCAGCCATCGCCGCCAGGGCATCGCCCGTGCCCTGCTGGGC                                              <  1:152281/123‑1
CCCATCGTCCTGGGCTGGCAGCGACAGCGCAAAGCCCAGCACGATGGGCAGGCCTGTGCATTGGCCTTTCTGGCCGTGTGCGCCAGCCATCGCCGCCAGGGCATCGCCCGTGCCCTGCTGGGC                                              >  2:152281/1‑123
           GGGCTGGCAGCGACAGCGCAAAGCCCAGGACGATGGGCAGGCCTGTGCATTGGCCTTTCTGGCCGTGTGCGCCAGCCATCGCCGCCAGGGCATCGCCCGTGCCCTGCTGGGCGACCTGCGCTCACGCCATGCCTGCGTGGAGCTGAACGC        >  1:26484/1‑150
                 GCAGCGACAGCGCAAAGCCCAGGACGATGGGCAGGCCTGTGCATTGGCCTTTCTGGCCGTGTGCGCCAGCCATCGCCGCCAGGGCATCGCCCGTGCCCTGCTGGGCGACCTGCGCTCACGCCATGCCTGCGTGGAGCTGAACGCCTTTGC  >  2:229785/1‑150
                 GCAGCGACAGCGCAAAGCCCAGGACGATGGGCAGGCCTGTGCATTGGCCTTTCTGGCCGTGTGCGCCAGCCATCGCCGCCAGGGCATCGCCCGTGCCCTGCTGGGCGACCTGCGCTCACGCCATGCCTGCGTGGAGCTGAACGCCTTTGC  >  2:229800/1‑150
                                                                                                                                                                       
CCCATCGTCCTGGGCTGGCAGCGACAGCGCAAAGCCCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4132652‑4132612
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCGATGGGCAGGCCTGTGCATTGGCCTTTCTGGCCGTGTGCGCCAGCCATCGCCGCCAGGGCATCGCCCGTGCCCTGCTGGGCGACCTGCGCTCACGCCATGCCTGCGTGGAGCTGAACGCCTTTGC  >  NC_002947/4132646‑4132771

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.