New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4132612 =20 (1.200)5 (0.300) 4/284 1.6 24.5% coding (245/687 nt) PP_3634 GNAT family acetyltransferase
?NC_002947 4132646 = 11 (0.660)coding (279/687 nt) PP_3634 GNAT family acetyltransferase

TCGCCATCGCCGTCGACAACCCGCTGTACCCGCTGTACCAGTACGGCGTCGGCATGGAAGTCCACCAGTACCTGCAAGCGCTGGACGGCACCCGCGGTCTGGCTGTGGCGCTTACCCTGGCGCTGGATGCCGAAGCACCGGACCAGTTGCTGGGCTTTGCGCTGTCGCTGCCAGCCCAGGACGATGGGCAGGCCTGTGCATTGGCCTTTCTGGCCGTGTGCGCCAGCCATCGCCGCCAGGGCATCGCCCGTGCCCTGCTGGGCGACCTGCGCTCAC  >  NC_002947/4132465‑4132740
                                                                                                                                                   |                                                                                                                                
tCGCCATCGCCGTCGACAACCCGCTGTACCCGCTGTACCAGTACGGCGTCGGCATGGAAGTCCACCAGTACCTGCAAGCGCTGGACGGCACCCGCGGTCTGGCTGTGGCGCTTACCCTGGCGCTGGATGCCGAAGCACCGGACCAGTTGc                                                                                                                                >  1:197903/1‑150 (MQ=255)
   ccATCGCCGTCGACAACCCGCTGTACCCGCTGTACCAGTACGGCGTCGGCATGGAAGTCCACCAGTACCTGCAAGCGCTGGACGGCACCCGCGGTCTGGCTGTGGCGCTTACCCTGGCGCTGGATGCCGAAGCACCGGACCAGTTGCTgg                                                                                                                             <  1:252798/150‑1 (MQ=255)
          cGTCGACAACCCGCTGTACCCGCTGTACCAGTACGGCGTCGGCATGGAAGTCCACCAGTACCTGCAAGCGCTGGACGGCACCCGCGGTCTGGCTGTGGCGCTTACCCTGGCGCTGGATGCCGAAGCACCGGACCAGTTGCTGGGCTTTgc                                                                                                                      <  2:194575/150‑1 (MQ=255)
          cGTCGACAACCCGCTGTACCCGCTGTACCAGTACGGCGTCGGCATGGAAGTCCACCAGTACCTGCAAGCGCTGGACGGCACCCGCGGTCTGGCTGTGGCGCTTACCCTGGCGCTGGATGCCGAAGCACCGGACCAGTTGCTGGGCTTTgc                                                                                                                      <  2:286926/150‑1 (MQ=255)
           gTCGACAACCCGCTGTACCCGCTGTACCAGTACGGCGTCGGCATGGAAGTCCACCAGTACCTGCAAGCGCTGGACGGCACCCGCGGTCTGGCTGTGGCGCTTACCCTGGCGCTGGATGCCGAAGAACCGGACCAGTTGCTGGGCTTTgcg                                                                                                                     >  1:185168/1‑150 (MQ=255)
              gACAACCCGCTGTACCCGCTGTACCAGTACGGCGTCGGCATGGAAGTCCACCAGTACCTGCAAGCGCTGGACGGCACCCGCGGTCTGGCTGTGGCGCTTACCCTGGCGCTGGATGCCGAAGCACCGGACCAGTTGCTGGGCTTTGCGCTg                                                                                                                  >  1:166719/1‑150 (MQ=255)
                  acccgctgtacccgctgtACCAGTACGGCGTCGGCATGGAAGTCCACCAGTACCTGCAAGCGCTGGACGGCACCCGCGGTCTGGCTGTGGCGCTTACCCTGGCGCTGGATGCCGAAGCACCGCACCAGATGCTGGGCTTTGCGCTGTCGc                                                                                                              >  2:283836/1‑150 (MQ=255)
                   cccgctgtacccgctgtaCCAGTACGGCGTCGGCATGGAAGTCCACCAGTACCTGCAAGCGCTGGACGGCACCCGCGGTCTGGCTGTGGCGCTTACCCTGGCGCTGGATGCCGAAGCACCGGACCAGTTGCTGGGCTTTGCGCTGTCGCt                                                                                                             <  1:207812/150‑1 (MQ=255)
                   cccgctgtacccgctgtaCCAGTACGGCGTCGGCATGGAAGTCCACCAGTACCTGCAAGCGCTGGACGGCACCCGCGGTCTGGCTGTGGCGCTTACCCTGGCGCTGGATGCCGAAGCACCGGACCAGTTGCTGGGCTTTGCGCTGTCGCt                                                                                                             <  1:14811/150‑1 (MQ=255)
                    ccgctgtacccgctgtacCAGTACGGCGTCGGCATGGAAGTCCACCAGTACCTGCAAGCGCTGGACGGCACCCGCGGTCTGGCTGTGGCGCTTACCCTGGCGCTGGATGCCGAAGCACCGGACCAGTTGCTGGGCTTTGCGCTGTCGCTg                                                                                                            >  2:302722/1‑150 (MQ=255)
                     gcaaaggcgttcagctccacgcaggcatggcgtgagcgcaggtcgcccagcagggcacgggcgatgccctggcggcgatggctggcgcacacggccagaaaggccaatgcacaggcctgcccatcgTCCTGGGCTTTGCGCTGTCGCTGc                                                                                                           >  2:229785‑M1/127‑150 (MQ=255)
                     gcaaaggcgttcagctccacgcaggcatggcgtgagcgcaggtcgcccagcagggcacgggcgatgccctggcggcgatggctggcgcacacggccagaaaggccaatgcacaggcctgcccatcgTCCTGGGCTTTGCGCTGTCGCTGc                                                                                                           >  2:229800‑M1/127‑150 (MQ=255)
                           gcgttcagctccacgcaggcatggcgtgagcgcaggtcgcccagcagggcacgggcgatgccctggcggcgatggctggcgcacacggccagaaaggccaatgcacaggcctgcccatcgTCCTGGGCTTTGCGCTGTCGCTGCCAGccc                                                                                                     >  1:26484‑M1/121‑150 (MQ=255)
                             ccgctgtaccAGTACGGCGTCGGCATGGAAGTCCACCAGTACCTGCAAGCGCTGGACGGCACCCGCGGTCTGGCTGTGGCGCTTACCCTGGCGCTGGATGCCGAAGCACCGGACCAGTTGCTGGGCTTTGCGCTGTCGCTGCCAGccatc                                                                                                   >  1:252690/1‑147 (MQ=255)
                                      cAGTACGGCGTCGGCATGGAAGTCCACCAGTACCTGCAAGCGCTGGACGGCACCCGCGGTCTGGCTGTGGCGCTTACCCTGGCGCTGGATGCCGAAGCACCGGACCAGTTGCTGGGCTTTGCGCTGTCGCTGCCAGCCCAGGACGATggg                                                                                          >  2:371023/1‑150 (MQ=255)
                                                       ggAAGTCCACCAGTACCTGCAAGCGCTGGACGGCACCCGCGGTCTGGCTGTGGCGCTTACCCTGGCGCTGGATGCCGAAGCACCGGACCAGTTGCTGGGCTTTGCGCTGTCGCTGCCAGCCCAGGACGATGGGCAGGCCTGTGCATTGGc                                                                         >  2:255565/1‑150 (MQ=255)
                                                            tCCACCAGTACCTGCAAGCGCTGGACGGCACCCGCGGTCTGGCTGTGGCGCTTACCCTGGCGCTGGATGCCGAAGCACCGGACCAGTTGCTGGGCTTTGCGCTGTCGCTGCCAGCCCAGGACGATGGGCAGGCCTGTGCATTGGCCTTTc                                                                    >  2:141639/1‑150 (MQ=255)
                                                                 gcccagcagggcacgggcgatgccctggcggcgatggctggcgcacacggccagaaaggccaatgcacaggcctgcccatcgTGCTGGGCTTTGCGCTGTCGCTGCCAGCCCAGGACGATggg                                                                                          >  2:152281‑M1/83‑123 (MQ=255)
                                                                 gcccagcagggcacgggcgatgccctggcggcgatggctggcgcacacggccagaaaggccaatgcacaggcctgcccatcgTGCTGGGCTTTGCGCTGTCGCTGCCAGCCCAGGACGATggg                                                                                          <  1:152281‑M1/41‑1 (MQ=255)
                                                                       cTGCAAGCGCTGGACGGCACCCGCGGTCTGGCTGTGGCGCTTACCCTGGCGCTGGATGCCGAAGCACCGGACCAGTTGCTGGGCTTTGCGCTGTCGCTGCCAGCCCAGGACGATGGGCAGGCCTGTGCATTGGCCTTTCTGGCCGTGTgc                                                         >  2:197403/1‑150 (MQ=255)
                                                                                    aCGGCACCCGCGGTCTGGCTGTGGCGCTTACCCTGGCGCTGGATGCCGAAGAACCGGACCAGTTGCTGGGCTTTGCGCTGTCGCTGCCAGCCCAGGACGATGGGCAGGCCTGTGCATTGGCCTTTCTGGCCGTGTGCGCCAGCCATcgcc                                            <  2:185168/150‑1 (MQ=255)
                                                                                        cACCCGCGGTCTGGCTGTGGCGCTTACCCTGGCGCTGGATGCCGAAGCACCGGACCAGTTGCTGGGCTTTGCGCTGTCGCTGCCAGCCCAGGACGATGGGCAGGCCTGTGCATTGGCCTTTCTGGCCGTGTGCGCCAGCCATCGCCGCCa                                        <  2:303115/150‑1 (MQ=255)
                                                                                             gcgGTCTGGCTGTGGCGCTTACCCTGGCGCTGGATGCCGAAGCACCGGACCAGTTGCTGGGCTTTGCGCTGTCGCTGCCAGCCCAGGACGATGGGCAGGCCTGTGCATTGGCCTTTCTGGCCGTGTGCGCCAGCCATCGCCGCCAGGGCa                                   <  1:198116/150‑1 (MQ=255)
                                                                                               ggTCTGGCTGTGGCGCTTACCCTGGCGCTGGATGCCGAAGCACCGGACCAGTTGCTGGGCTTTGCGCTGTCGCTGCCAGCCCAGGACGATGGGCAGGCCTGTGCATTGGCCTTTCTGGCCGTGTGCGCCAGCCATCGCCGCCAGGGCATc                                 <  1:78851/150‑1 (MQ=255)
                                                                                                                              aTGCCGAAGCACCGGACCAGTTGCTGGGCTTTGCGCTGTCGCTGCCAGCCCAGGACGATGGGCAGGCCTGTGCATTGGCCTTTCTGGCCGTGTGCGCCAGCCATCGCCGCCAGGGCATCGCCCGTGCCCTGCTGGGCGACCTGCGCTCAc  <  1:371023/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                
TCGCCATCGCCGTCGACAACCCGCTGTACCCGCTGTACCAGTACGGCGTCGGCATGGAAGTCCACCAGTACCTGCAAGCGCTGGACGGCACCCGCGGTCTGGCTGTGGCGCTTACCCTGGCGCTGGATGCCGAAGCACCGGACCAGTTGCTGGGCTTTGCGCTGTCGCTGCCAGCCCAGGACGATGGGCAGGCCTGTGCATTGGCCTTTCTGGCCGTGTGCGCCAGCCATCGCCGCCAGGGCATCGCCCGTGCCCTGCTGGGCGACCTGCGCTCAC  >  NC_002947/4132465‑4132740

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.