| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4322733 = | 10 (0.600) | 4 (0.250) | 4/270 | 1.5 | 29.1% | intergenic (‑3/‑415) | PP_3791/PP_5629 | site‑specific recombinase/protease/amidase |
| ? | NC_002947 | 4322760 = | 10 (0.640) | intergenic (‑30/‑388) | PP_3791/PP_5629 | site‑specific recombinase/protease/amidase | |||||
CAGACCGCCGGGGGCATTTAGTGAGCTCCTCAGACTTTGTCTTCAGTAAGTGACCGCGTTTGGCCGATAACTGTTCTCCACGAAGGACAACAATGGGTCGGTTAGCGCCTCTGGATTGGGTTGATCATCCTTGTCCTACCTCACATGGAGGACAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4322888‑4322733‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggacaagGATGATCAACCCAATCCAGAGGCGCTAACCGACCCATTGTTGTCCTTCGTGGAGAACAGTTATCGGCCAAACGCGGTCACTTACTGAAGACAAAGTCTGAGGAGCTCACTAAATGCCCCCGGCGGTCTGGAGTCAATTGCGT > NC_002947/4322760‑4322901 CAGACCGCCGGGGGCATTTAGTGAGCTCCTCAGACTTTGTCTTCAGTAAGTGACCGCGTTTGGCCGATAACTGTTCTCCACGAAGGACAACAATGGGTCGGTTAGCGCCTCTGGATTGGGTTGATCATCCTTGTCCTACCTCACATGGAG > 1:314619/1‑150CAGACCGCCGGGGGCATTTAGTGAGCTCCTCAGACTTTGTCTTCAGTAAGTGACCGCGTTTGGCCGATAACTGTTCTCCACGAAGGACAACAATGGGTCGGTTAGCGCCTCTGGATTGGGTTGATCATCCTTGTCCTACCTCACATGGAG < 1:78611/150‑1CAGACCGCCGGGGGCATTTAGTGAGCTCCTCAGACTTTGTCTTCAGTAAGTGACCGCGTTTGGCCGATAACTGTTCTCCACGAAGGACAACAATGGGTCGGTTAGCGCCTCTGGATTGGGTTGATCATCCTTGTCCTACCTCACATGGAG > 2:263265/1‑150 TTTGTCTTCAGTAAGTGACCGCGTTTGGCCGATAACTGTTCTCCACGAAGGACAACAATGGGTCGGTTAGCGCCTCTGGATTGGGTTGATCATCCTTGTCCTACCTCACATGGAG < 1:69709/115‑1 TTTGTCTTCAGTAAGTGACCGCGTTTGGCCGATAACTGTTCTCCACGAAGGACAACAATGGGTCGGTTAGCGCCTCTGGATTGGGTTGATCATCCTTGTCCTACCTCACATGGAG > 2:69709/1‑115 CATCCTTGTCCTACCTCACATGGAGGACAAGGATGATCAACCCAATCCAGAGGCGCTAACCGACCCATTGTTGTCCTTCGTGGAGAACAGTTATCGGCCAAACGCGGTCA > 1:269055/1‑110 CATCCTTGTCCTACCTCACATGGAGGACAAGGATGATCAACCCAATCCAGAGGCGCTAACCGACCCATTGTTGTCCTTCGTGGAGAACAGTTATCGGCCAAACGCGGTCA < 2:269055/110‑1 TTGTCCTACCTCACATGGAGGACAAGGATGATCAACCCAATCCAGAGGCGCTAACCGACCCATTGTTGTCCTTCGTGGAGAACAGTTATCGGCCAAACGCGGTCACTTACTGAAGACAAAGTCTGAGGAGCTCACTAAATGCCCCCGGCG > 2:310815/1‑150 CCTCACATGGAGGACAAGGATGATCAACCCAATCCAGAGGCGCTAACCGACCCATTGTTGTCCTTCGTGGAGAACAGTTATCGGCCAAACGCGGTCACTTACTGAAGACAAAGTCTGAGGAGCTCACTAAATGCCCCCGGCGGTCTGGAG < 1:310815/150‑1 AGGACAAGGATGATCAACCCAATCCAGAGGCGCTAACCGACCCATTGTTGTCCTTCGTGGAGAACAGTTATCGGCCAAACGCGGTCACTTACTGAAGACAAAGTCTGAGGAGCTCACTAAATGCCCCCGGCGGTCTGGAGTCAATTGCGT < 2:359776/150‑1 GGATGATCAACCCAATCCAGAGGCGCTAACCGACCCATTGTTGTCCTTCGTGGAGAACAGTTATCGGCCAAACGCGGTCACTTACTGAAGACAAAGTCTGAGGAGCTCACTAAATGCCCCCGGC < 1:10987/124‑1 GGATGATCAACCCAATCCAGAGGCGCTAACCGACCCATTGTTGTCCTTCGTGGAGAACAGTTATCGGCCAAACGCGGTCACTTACTGAAGACAAAGTCTGAGGAGCTCACTAAATGCCCCCGGC > 2:10987/1‑124 CAGACCGCCGGGGGCATTTAGTGAGCTCCTCAGACTTTGTCTTCAGTAAGTGACCGCGTTTGGCCGATAACTGTTCTCCACGAAGGACAACAATGGGTCGGTTAGCGCCTCTGGATTGGGTTGATCATCCTTGTCCTACCTCACATGGAGGACAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4322888‑4322733‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggacaagGATGATCAACCCAATCCAGAGGCGCTAACCGACCCATTGTTGTCCTTCGTGGAGAACAGTTATCGGCCAAACGCGGTCACTTACTGAAGACAAAGTCTGAGGAGCTCACTAAATGCCCCCGGCGGTCTGGAGTCAATTGCGT > NC_002947/4322760‑4322901 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |