New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3124809 =	15 (0.900)	5 (0.310)	3/274	1.8	25.4%	coding (279/888 nt)	PP_2740	MerR family transcriptional regulator
	?	NC_002947	3124830 =	15 (0.940)					coding (300/888 nt)	PP_2740	MerR family transcriptional regulator

GCCATCGCTTGTACACGGCTCAGGATGTGCAGCGCATACGTGACATCTTGCGCTGGACCGCCAACGGCCTGCCCATCAGCAAGGTTGGCGACAGGCTCGCCGGCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCAAAGGCCACGGTGCTGCGGGACGTGCTGATGCCGGTTTGGCATGACCTGGCTTCAGGTACTGCG  >  NC_002947/3124661‑3124956                                                                                                                                                     |                                                                                                                                                    ccattggctacgctggcctggcgcagtacctgaagccaggtcatgccaaaccggcatcagcacgtcccgcagcaccgtggcctttggcaaaagtgtgaacagctgtccatggatcgcttccagcgcctgcgcatcgaatgccctggaagc                                                                                                                                                    <  2:178873‑M1/2‑1 (MQ=255)    aTCGCTTGTACACGGCTCAGGATGTGCAGCGCATACGTGACATCTTGCGCTGGACCGCCAACGGCCTGCCCATCAGCAAGGTTGGCGACAGGCTCGCCGGCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGgcgcg                                                                                                                                                 >  1:135682/1‑150 (MQ=255)            tACACGGCTCAGGATGTGCAGCGCATACGTGACATCTTGCGCTGGACCGCCAACGGCCTGCCCATCAGCAAGGTTGGCGACAGGCTCGCCGGCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGtt                                                                                                                                         >  2:363329/1‑150 (MQ=255)                     gcgcagtacctgaagccaggtcatgccaaaccggcatcagcacgtcccgcagcaccgtggcctttggcaaaagtgtgaacagctgtccatggatcgcttccagcgcctgcgcatcgaatgccctggaaGCGCGCCGCCGTTGCGCGCGCt                                                                                                                                >  2:76914‑M1/129‑150 (MQ=255)                                gcgcATACGTGACATCTTGCGCTGGACCGCCAACGGCCTGCCCATCAGCAAGGTTGGCGACAGGCTCGCCGGCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCAtt                                                                                                                     <  1:191864/150‑1 (MQ=255)                                                           cGCCAACGGCCTGCCCATCAGCAAGGTTGGCGACAGGCTCGCCGGCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCa                                                                                          >  2:121676/1‑150 (MQ=255)                                                             ccAACGGCCTGCCCATCAGCAAGGTTGGCGACAGGCTCGCCGGCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGa                                                                                                                  >  1:62675/1‑124 (MQ=255)                                                             ccAACGGCCTGCCCATCAGCAAGGTTGGCGACAGGCTCGCCGGCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGa                                                                                                                  <  2:62675/124‑1 (MQ=255)                                                                         ccATCAGCAAGGTTGGCGACAGGCTCGCCGGCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTca                                                                            <  1:363329/150‑1 (MQ=255)                                                                              aGCAAGGTTGGCGACAGGCTCGCCGGCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACtt                                                                       >  1:224430/1‑150 (MQ=255)                                                                                  aGGTTGGCGACAGGCTCGCCGGCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGc                                                                   <  1:287422/150‑1 (MQ=255)                                                                                     ttGGCGACAGGCTCGCCGGCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCaa                                                                >  2:21489/1‑150 (MQ=255)                                                                                              tgtgaacagctgtccatggatcgcttccagcgcctgcgcatcgaatgccctggaaGCGCGCCGCCGTTGCGCGCGCTTcc                                                                                                                             >  1:303660‑M1/56‑80 (MQ=255)                                                                                              tgtgaacagctgtccatggatcgcttccagcgcctgcgcatcgaatgccctggaaGCGCGCCGCCGTTGCGCGCGCTTcc                                                                                                                             >  1:303656‑M1/56‑80 (MQ=255)                                                                                              tgtgaacagctgtccatggatcgcttccagcgcctgcgcatcgaatgccctggaaGCGCGCCGCCGTTGCGCGCGCTTcc                                                                                                                             <  2:303656‑M1/25‑1 (MQ=255)                                                                                              tgtgaacagctgtccatggatcgcttccagcgcctgcgcatcgaatgccctggaaGCGCGCCGCCGTTGCGCGCGCTTcc                                                                                                                             <  2:303660‑M1/25‑1 (MQ=255)                                                                                                       gCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCAAAGGCCACGGTGCTGCggg                                              <  1:184528/150‑1 (MQ=255)                                                                                                          aGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCAAAGGCCACGGTGCTGCGGGACg                                           <  2:61321/150‑1 (MQ=255)                                                                                                          aGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCAAAGGCCACGGTGCTGCGGGACg                                           <  2:61326/150‑1 (MQ=255)                                                                                                             cTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCAAAGGCCACGGTGCTGCGGGACGTGc                                        >  2:370332/1‑150 (MQ=255)                                                                                                                                                   tGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCAAAGGCCACGGTGCTGCGGGACGTGCTGATGCCGGTTTGGCATGACCTGGCTTCAGGTACTgcg  >  1:95563/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GCCATCGCTTGTACACGGCTCAGGATGTGCAGCGCATACGTGACATCTTGCGCTGGACCGCCAACGGCCTGCCCATCAGCAAGGTTGGCGACAGGCTCGCCGGCCAGCCTGAGGCGCCTGTGCAGCAGCCCTCGGCCTTTGACGACTGGCGCGCCGCCGTTGCGCGCGCTTCCAGGGCATTCGATGCGCAGGCGCTGGAAGCGATCCATGGACAGCTGTTCACACTTTTGCCAAAGGCCACGGTGCTGCGGGACGTGCTGATGCCGGTTTGGCATGACCTGGCTTCAGGTACTGCG  >  NC_002947/3124661‑3124956

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.