New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 353381	15 (0.900)	4 (0.250)	4/278	1.6	21.3%	coding (952/1179 nt)	cbcV	choline/betaine/carnitine ABC transporter ATP binding protein
	?	NC_002947	= 353398	15 (0.930)					coding (935/1179 nt)	cbcV	choline/betaine/carnitine ABC transporter ATP binding protein

ATCTGCAGTGCCTCACGCATGCCGATGTCGGCGTGCACCACGGTCGGCCTGCGCTCCAGCAGCTCCACATCTTGCCCCGGTGCCCATTTCTGCATGTCCAGCCCGTTCTGGCCTTGGCGTGCACGCTTGAGCGCGCCGCCTTCGCCAAGGTCCAGCCACGAATCGATACCTGGGTCCAGGCACACCGAGCCATTGACCCGCTTGCAGTTGTCCAGGCTGCGCATCAGGCTGCGCCCGCACAGCACGTTCAGCGGGTTGGTATGGGCGACGAAGGTGCGCACG  >  NC_002947/353263‑353544                                                                                                                                        |                                                                                                                                                   aTCTGCAGTGCCTCACGCATGCCGATGTCGGCGTGCACCACGGTCGGCCTGCGCTCCAGCAGCTCCACATCTTGCCCCGGTGCCCATTTCTGCATGTCCAGCCCGTTCTGGCCTTGGCGTGCACGCTTGAGCGCGCCGCCTTCGCCAAgg                                                                                                                                      <  1:333574/150‑1 (MQ=255)                      ccGATGTCGGCGTGCACCACGGTCGGCCTGCGCTCCAGCAGCTCCACATCTTGCCCCGGTGCCCATTTCTGCATGTCCAGCCCGTTCTGGCCTTGGCGTGCACGCTTGAGCGCGCCGCCTTCGCCAAGGTCCAGCCACGAATCGATACCt                                                                                                                 <  2:87098/150‑1 (MQ=255)                                                       tCCAGCAGCTCCACATCTTGCCCCGGTGCCCATTTCTGCATGTCCAGCCCGTTCTGGCCTTGGCGTGCACGCTTGAGCGCGCCGCCTTCGCCAAGGTCCAGCCACGAATCGATACCTGGGTCCAGGCACACCGAGCCATTGACCCGCTTg                                                                                >  1:309666/1‑150 (MQ=255)                                                                  cacaTCTTGCCCCGGTGCCCATTTCTGCATGTCCAGCCCGTTCTGGCCTTGGCGTGCACGCTTGAGCGCGCCGCCTTCGCCAAGGTCCAGCCACGAATCGATACCTGGGTCCAGGCACACCGAGCCATTGACCCGCt                                                                                  <  1:333869/137‑1 (MQ=255)                                                                  cacaTCTTGCCCCGGTGCCCATTTCTGCATGTCCAGCCCGTTCTGGCCTTGGCGTGCACGCTTGAGCGCGCCGCCTTCGCCAAGGTCCAGCCACGAATCGATACCTGGGTCCAGGCACACCGAGCCATTGACCCGCt                                                                                  <  1:58438/137‑1 (MQ=255)                                                                  cacaTCTTGCCCCGGTGCCCATTTCTGCATGTCCAGCCCGTTCTGGCCTTGGCGTGCACGCTTGAGCGCGCCGCCTTCGCCAAGGTCCAGCCACGAATCGATACCTGGGTCCAGGCACACCGAGCCATTGACCCGCt                                                                                  >  2:58438/1‑137 (MQ=255)                                                                  cacaTCTTGCCCCGGTGCCCATTTCTGCATGTCCAGCCCGTTCTGGCCTTGGCGTGCACGCTTGAGCGCGCCGCCTTCGCCAAGGTCCAGCCACGAATCGATACCTGGGTCCAGGCACACCGAGCCATTGACCCGCt                                                                                  >  2:333869/1‑137 (MQ=255)                                                                       cTTGCCCCGGTGCCCATTTCTGCATGTCCAGCCCGTTCTGGCCTTGGCGTGCACGCTTGAGCGCGCCGCCTTCGCCAAGGTCCAGCCACGAATCGATACCTGGGTCCAGGCACACCGAGCCATTGACCCGCTTGCAGTTGTCCAGGCTgc                                                                <  1:63635/150‑1 (MQ=255)                                                                                                 tCCAGCCCGTTCTGGCCTTGGCGTGCACGCTTGAGCGCGCCGCCTTCGCCAAGGTCCAGCCACGAATCGATACCTGGGTCCAGGCACACCGAGCCATTGACCCGCTTGCAGTTGTCCAGGCTGCGCATCAGGCTGCGCCCGCACAGCACg                                      >  2:75480/1‑150 (MQ=255)                                                                                                   cAGCCCGTTCTGGCCTTGGCGTGCACGCTTGAGCGCGCCGCCTTCGCCAAGGTCCAGCCACGAATCGATACCTGGGTCCAGGCACACCGAGCCATTGACCCGCTTGCAGTTGTCCAGGCTGCGCATCAGGCTGCGCCCGCACAGCACGtt                                    >  2:84976/1‑150 (MQ=255)                                                                                                   cAGCCCGTTCTGGCCTTGGCGTGCACGCTTGAGCGCGCCGCCTTCGCCAAGGTCCAGCCACGAATCGATACCTGGGTCCAGGCACACCGAGCCATTGACCCGCTTGCAGTTGTCCAGGCTGCGCATCAGGCTGCGCCCGCACAGCACGtt                                    >  2:44364/1‑150 (MQ=255)                                                                                                       ccGTTCTGGCCTTGGCGTGCACGCTTGAGCGCGCCGCCTTCGCCAAGGTCCAGCCACGACTCGATACCTGGGTCCAGGCACACCGAGCCATTGACCCGCTTGCAGTTGTCCAGGCTGCGCATCAGGCTGCGCCCGCACAGCACGTTCAGc                                <  2:286489/150‑1 (MQ=255)                                                                                                             tGGCCTTGGCGTGCACGCTTGAGCGCGCcgccttcgccaaggtcagaacgggctggacatgcagaaatgggcaccggggcaagatgtggagctgctggagcgcaggccgaccgtggtgcacgccgacatcggcatgcgtgaggcactgca                          <  2:287387‑M2/150‑123 (MQ=255)                                                                                                               gCCTTGGCGTGCACGCTTGAGCGCGCcgccttcgccaaggccagaacgggctggacatgcagaaatgggcaccggggcaagatgtggagctgctggagcgcaggccgaccgtggtgcacgccgacatcggcatgcgtgaggcactgcaga                        <  2:254884‑M2/150‑125 (MQ=255)                                                                                                               gCCTTGGCGTGCACGCTTGAGCGCGCCGCCTTCGCCAAGGTCCAGCCACGAATCGATACCTGGGTCCAGGCACACCGAGCCATTGACCCGCTTGCAGTTGTCCAGGCTGCGCATCAGGCTGCGCCCGCACAGCACGTTCAGCGGGTTGGt                        <  1:75480/150‑1 (MQ=255)                                                                                                                  ttGGCGTGCACGCTTGAGCGCGCcgccaaggccagaacgggctggacatgcagaaatgggcaccggggcaagatgtggagctgctgga                                                                                   >  1:98688‑M2/1‑23 (MQ=255)                                                                                                                  ttGGCGTGCACGCTTGAGCGCGCcgccaaggccagaacgggctggacatgcagaaatgggcaccggggcaagatgtggagctgctgga                                                                                   <  2:98688‑M2/88‑66 (MQ=255)                                                                                                                         gCACGCTTGAGCGCGCCGCCTTCGCCAAGGTCCAGCCACGAATCGATACCTGGGTCCAGGCACACCGAGCCATTGACCCGCTTGCAGTTGTCCAGGCTGCGCATCAGGCTGCGCCCGCACAGCACGTTCAGCGGGTTGGTATGGGcgacg              >  1:344206/1‑150 (MQ=255)                                                                                                                                     gcgcCGCCTTCGCCAAGGTCCAGCCACGAATCGATACCTGGGTCCAGGCACACCGAGCCATTGACCCGCTTGCAGTTGTCCAGGCTGCGCATCAGGCTGCGCCCGCACAGCACGTTCAGCGGGTTGGTATGGGCGACGAAGGTGCGCACg  >  1:136489/1‑150 (MQ=255)                                                                                                                                        |                                                                                                                                                   ATCTGCAGTGCCTCACGCATGCCGATGTCGGCGTGCACCACGGTCGGCCTGCGCTCCAGCAGCTCCACATCTTGCCCCGGTGCCCATTTCTGCATGTCCAGCCCGTTCTGGCCTTGGCGTGCACGCTTGAGCGCGCCGCCTTCGCCAAGGTCCAGCCACGAATCGATACCTGGGTCCAGGCACACCGAGCCATTGACCCGCTTGCAGTTGTCCAGGCTGCGCATCAGGCTGCGCCCGCACAGCACGTTCAGCGGGTTGGTATGGGCGACGAAGGTGCGCACG  >  NC_002947/353263‑353544

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.