New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1617825 =	20 (0.520)	12 (0.350)	9/234	1.1	43.9%	intergenic (‑38/+135)	PP_1417/PP_1418	tricarboxylate transport protein TctB/tricarboxylate transport protein TctC
	?	NC_002947	1617914 =	13 (0.380)					intergenic (‑127/+46)	PP_1417/PP_1418	tricarboxylate transport protein TctB/tricarboxylate transport protein TctC

GGCCTGATCCAGTAAGCCTGTCGGACTCACCACCACTCCTGTGGGAGCGGCCTTGTGTCGGGATCGGGCGCGAAGCGGCCCCTGGCACAGCCGATACGATGCTTCGTACAGATCGCATCGGCAGGTTTAGCGGCAGCTTCGCGCCCGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1617974‑1617825 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttcgcgcccgatcCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGCTCTTCG  >  NC_002947/1617914‑1618038                                                                                                                                                                                                                                                                                     GGCCTGATCCAGTAAGCCTGTCGGACTCACCACCACTCCTGTGGGAGCGGCCTTGTGTCGGGATCGGGCGCGAAGCGGCCCCTGGCACAGCCGATACGATGCTTCGTACAGATCGCATCGGCAGGTTTAGCGGCAG                                                                                                                                             <  1:36202/136‑1                                                                                            CGATACGATGCTTCGTACAGATCGCATCGGCAGGTTTAGCGGCAGCTTCGCGCCCGATCCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGC                                                  >  1:102602/1‑136                                                                                            CGATACGATGCTTCGTACAGATCGCATCGGCAGGTTTAGCGGCAGCTTCGCGCCCGATCCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGC                                                  >  1:745825/1‑136                                                                                             GATACGATGCTTCGTACAGATCGCATCGGCAGGTTTAGCGGCAGCTTCGCGCCCGATCCCGACACAAGGCCGCTCC                                                                                                             >  1:181999/1‑76                                                                                             GATACGATGCTTCGTACAGATCGCATCGGCAGGTTTAGCGGCAGCTTCGCGCCCGATCCCGACACAAGGCCGCTCC                                                                                                             <  2:181999/76‑1                                                                                                  GATGCTTCGTACAGATCGCATCGGCAGGTTTAGCGGCAGCTTCGCGCCCGATCCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGC                                                                   >  1:780191/1‑113                                                                                                  GATGCTTCGTACAGATCGCATCGGCAGGTTTAGCGGCAGCTTCGCGCCCGATCCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGC                                                                   <  2:780191/113‑1                                                                                                                    CATCGGCAGGTTTAGCGGCAGCTTCGCGCCCGCTCGCGACGCAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGCCAGGCTTACTGGATCAGGCCGAAGGCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTC                          >  2:910060/1‑136                                                                                                                    CATCGGCAGGTTTAGCGGCAGCTTCGCGCCCGATCGCGACGCAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTACGCCACTTGCTTg                          >  2:907081/1‑135                                                                                                                                      CAGCTTCGCGCCCGATCCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGC        >  1:382887/1‑136                                                                                                                                      CAGCTTCGCGCCCGATCCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGC        >  2:927255/1‑136                                                                                                                                       AGCTTCGCGCCCGATCCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACA                    <  1:737577/123‑1                                                                                                                                       AGCTTCGCGCCCGATCCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACA                    >  2:737577/1‑123                                                                                                                                           TCGCGCCCGATCGCGACGCAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGCTCTTg   >  1:797811/1‑135                                                                                                                                           TCGCGCCCGATCCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGCTCTTC   >  1:60805/1‑136                                                                                                                                            CGCGCCCGATCCCGCCACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCATGGCCAGCGCCTTGTAGTCAGCCACATTCTTCTTCACATAGCCGTCCCGCTCTACG  >  2:160125/1‑136                                                                                                                                                                                                                                                                                     GGCCTGATCCAGTAAGCCTGTCGGACTCACCACCACTCCTGTGGGAGCGGCCTTGTGTCGGGATCGGGCGCGAAGCGGCCCCTGGCACAGCCGATACGATGCTTCGTACAGATCGCATCGGCAGGTTTAGCGGCAGCTTCGCGCCCGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1617974‑1617825 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttcgcgcccgatcCCGACACAAGGCCGCTCCCACAGGAGTGGTGGTGAGTCCGACAGGCTTACTGGATCAGGCCGAATTCCTTGGCCAGCGCCTTGTAGTCAGCCACTTGCTTCTTCACATAGCCGTCCAGCTCTTCG  >  NC_002947/1617914‑1618038

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.