New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_pgi 4249656 =807 (15.230)3 (0.060) 3/258 NT 0.40% coding (843/921 nt) malM maltose regulon periplasmic protein
?NC_000913_3_pae_pgi 4249717 = 722 (14.270)coding (904/921 nt) malM maltose regulon periplasmic protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 109 total aligned reads displayed.

CCCAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAGCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_pae_pgi/4249809‑4249656
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcagtGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATTAT  >  NC_000913_3_pae_pgi/4249717‑4249864
                                                                                                                                                                                                                                                                                                               
tgCAGGAAGGAAGCATAAAAAAACGTGCGCCAGGATACGCACCAGTTGTTGCAAAATCAGCACTGTGTGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAA                                                                                                                                                            <  2:232558/147‑1
tCCAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAA                                                                                                                                                            <  1:687235/148‑1
CCCAGGAATGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGACTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAA                                                                                                                                                            <  1:97134/149‑1
CCCAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGTAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAA                                                                                                                                                            >  1:772774/1‑149
CCCAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAA                                                                                                                                                            <  2:562740/149‑1
CCCAAGAAGGAAAGATAAAAAAAGGTGCGCCATGAGACTCACCAGTTGTTGCAAAATCAGCACTGGTGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAA                                                                                                                                                            <  1:782890/149‑1
 CCAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAG                                                                                                                                                           >  1:11050/1‑149
 CCAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAG                                                                                                                                                           <  1:667813/149‑1
 CCAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAG                                                                                                                                                           >  1:659501/1‑149
 CCAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAG                                                                                                                                                           >  1:874549/1‑149
 CCAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAG                                                                                                                                                           <  1:462782/149‑1
 CCAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTAGTAGCAATATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACAGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAG                                                                                                                                                           >  1:790131/1‑149
  catGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTTCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAGC                                                                                                                                                          <  2:1001597/146‑1
  CAGGAAGGAAGCATAAAAAAAGGTTCGCCAGGAGACGCACCCGTTGTTACAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAGC                                                                                                                                                          >  2:213135/1‑149
  CAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTCCCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCCTCAAGC                                                                                                                                                          >  1:212112/1‑149
  CAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCCGGCGTTCAGCTTCATCAAGa                                                                                                                                                          >  2:480375/1‑148
  CAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAac                                                                                                                                                          >  1:351280/1‑147
  CAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAGC                                                                                                                                                          >  1:436397/1‑149
  CAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAGC                                                                                                                                                          >  1:125600/1‑149
  CAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCAACAAGC                                                                                                                                                          >  1:477871/1‑149
  CAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGGTCAGCTTCATCAAGC                                                                                                                                                          >  1:57313/1‑149
  CAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATATCAATCCCAGGCGTTCAACTTCATCAAGC                                                                                                                                                          >  1:117112/1‑149
  CAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGATGATAAAGGTGGAACGGGAAGATGTAGATCCCAGGCGTTAAGCTTAATCAAGC                                                                                                                                                          >  1:585505/1‑149
  CAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCATTGCCTTTTACACTGCTGATAAAGGTGGAACGGACAGATGTCGATCCCAGGCGTTCAGCTTCATCAAGC                                                                                                                                                          >  2:692659/1‑149
  CAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCATTACATATTACACTGCTGATAAAGGTGGAACGGCCAGATGTAGATCCAAGGAGTTAAGCTACATCAAGC                                                                                                                                                          >  1:51413/1‑149
  CAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTGGCAAAATCAGCACTGTGGGGCGTAATTACAGCTTGCCTTTTACAGTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCGAGGCGTTCAGCTTCATCAAGC                                                                                                                                                          >  2:366060/1‑149
  CAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACACACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCCGCTTCAGCAAGC                                                                                                                                                          >  2:534282/1‑149
   AGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATACAGGTTGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCACGCA                                                                                                                                                         >  1:331332/1‑149
   AGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAGCA                                                                                                                                                         >  1:265281/1‑149
   AGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAGCA                                                                                                                                                         >  2:274338/1‑149
   AGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAGCA                                                                                                                                                         <  2:125600/149‑1
   AGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAGCA                                                                                                                                                         <  1:957481/149‑1
   AGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAGCA                                                                                                                                                         >  2:566641/1‑149
   AGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAACTTCATCAAGCA                                                                                                                                                         >  1:317581/1‑149
   AGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGCGCAGATGTCGATCCCAGGCGTTCAGCTTCGTCAAGCA                                                                                                                                                         >  1:402353/1‑149
   AGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTGGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTACTGATAAAGGTGGAACGGGCAGATGTCCATCCCAGGCGTTCCGCTGCCTCCAGCA                                                                                                                                                         >  2:492932/1‑149
   AGGAAGGAAGCATAAAAAAAGGTGCGCAAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCAATCCCAGGCGTTCAGCTTCATCAAGCA                                                                                                                                                         >  2:506072/1‑149
    GGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAGCAG                                                                                                                                                        <  1:358956/149‑1
    GGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAGCAG                                                                                                                                                        >  1:200168/1‑149
    GGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGATGGAACGGGCAGATGTCGATACCAGGCGTTCAGCTTCATCAAGCAG                                                                                                                                                        >  1:272636/1‑149
     GAAGGAAGCATAAAAAAAGGTTCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAGCAGT                                                                                                                                                       <  1:303686/149‑1
     GAAGGAAGCATAAAAAAAGGTGCGCCAGGTGACGTACCAAGTGTCGCCAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAGCAGT                                                                                                                                                       <  1:386407/149‑1
     GAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACTCACTAGTTGTTGCAAAATCAGCATTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAGCAGT                                                                                                                                                       <  1:501675/149‑1
     GAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAGTTACCCCTTGCCTTTTACACTGCTGATAAAGATGGGACGGGCAGATGTTGGTCCCAGGCGTGCAGCTTCATCAGGCAGT                                                                                                                                                       >  1:829165/1‑149
     GAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAGCAGT                                                                                                                                                       >  1:137861/1‑149
     GAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAGCAGT                                                                                                                                                       <  2:709824/149‑1
     GAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGCCGTTCAGCTTCATCAAGCAGT                                                                                                                                                       >  2:108584/1‑149
     GAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCAATGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGCTCCCAAGCGTTCAGCTTCATCAAGCAGT                                                                                                                                                       >  1:166927/1‑149
     GAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGATGCAAAATCAGCACTGTGGGGCGTAATTACCCCGTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCCTCAAGCAGT                                                                                                                                                       >  2:780967/1‑149
       AGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTGGTTGCAAAATCAGCCCTGTGGGGCGTAATTACCCCTTGCCTCTTACACTGCTACTAAAGCTGGAACGGGCAGATGTCGCTCCCAGGCGTTCACCCTCATCAAGCActct                                                                                                                                                     >  2:706353/1‑145
         GAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATAAAGCAGTatta                                                                                                                                                   >  1:253604/1‑145
                              CAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAG                                                                                                                                                           >  2:952623/1‑120
                                  AGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAG                                                                                                                                                           <  1:599201/116‑1
                                  AGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAG                                                                                                                                                           >  2:599201/1‑116
                                                                                               TGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAGCAGTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCT                                                            <  1:55780/149‑1
                                                                                                                                             TTCATCAACAGGGTAAAAGGCAAGGGGTAATTACGCCGCACAGTGGTGATTTTGCAACAAATAGTGCGTCTTCTGGCGCAACTTTTTTTATGCTTCCTTTCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGA             <  2:634831/149‑1
                                                                                                                                                   tattAGTGTAAAAGTGAAGGGGTAATTATGGTCAAGACTTCAGATTTTGCAACAACTGGTGTGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATC        <  1:437506/145‑1
                                                                                                                                                   tAGCTGTGTAAAAGTCAAGGTGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATC        <  1:618846/148‑1
                                                                                                                                                    AGCATTGTAAAAGGTAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCC       <  2:41375/149‑1
                                                                                                                                                    AGCAGTGTAAAAGGCAAGGTGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCC       <  2:829338/149‑1
                                                                                                                                                    AGCAGTGTAAAAGGCAAGGGGTAATTACGCCGCAAAGAGCTGTGTTTGCAACCCCTGGTACGTCTCCTGGCGCACCTTTTTCTATGCTTCCTTCCTGGGATATTAGCGATTTTTTATAGTAACTCAGTTCTTCTTCATTAAGCATATCC       >  2:867477/1‑149
                                                                                                                                                    AGCAGTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATATTAACTCACTTCTTCTTCACTAATAATATCC       >  2:347704/1‑149
                                                                                                                                                    AGCAGTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTACTAATTTCC       >  1:364536/1‑149
                                                                                                                                                    AGCAGTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCC       >  2:341550/1‑149
                                                                                                                                                    AGCAGTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCC       >  2:811602/1‑149
                                                                                                                                                    AGCAGTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCAATTCTTCTTCACTAGGAATATCC       >  2:938007/1‑149
                                                                                                                                                    AGCAGTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGAGCTATCAGCGATTTTTTATAGTAACGCACTTCTTCTTCACTCAGAGTATCC       >  2:876279/1‑149
                                                                                                                                                    AGCAGTGTAAAAGGCAAGGGGTAATTACGTTGATAGTTACTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCC       >  1:995072/1‑149
                                                                                                                                                    AGCAGTGGAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGACTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTTACTTATTCTTCACTAAGCATATCC       >  2:677458/1‑149
                                                                                                                                                     GCAGTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCA      <  1:831863/149‑1
                                                                                                                                                      CAGTTTAAAAGGCAAGGGGTCATTACGCCCCACAGTGCTGATTTTGCAACAACTGGCGCGTCTCCTGCCGCACCCTTTTTTATGCCTCCTTCCTTGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCAT     <  2:810346/149‑1
                                                                                                                                                      CAGTGTAAAAGGCAAGGGGTATTTACGCCCCACTGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCAT     <  1:327217/149‑1
                                                                                                                                                      CAGTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCAT     <  1:519039/149‑1
                                                                                                                                                      CAGTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCAT     >  1:911616/1‑149
                                                                                                                                                      CAGTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGACCGATTTTTTATAGTAACTAGCTTCTTCTTTACTAAGATTATCCAT     >  1:48636/1‑149
                                                                                                                                                      CAGTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTT                                                                           <  2:1005369/79‑1
                                                                                                                                                      CAGTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTT                                                                           >  1:1005369/1‑79
                                                                                                                                                      CAGTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGGGCGGCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCAT     <  1:443637/149‑1
                                                                                                                                                       AGTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGTTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCTATT    >  2:68208/1‑149
                                                                                                                                                       AGTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATT    >  2:565599/1‑149
                                                                                                                                                       AGTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATT    <  1:904354/149‑1
                                                                                                                                                       AGTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATT    <  2:826541/149‑1
                                                                                                                                                       AGTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTACTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATT    <  1:947777/149‑1
                                                                                                                                                       AGTGTAAAAGGCAAGGGGTAATTACGCCCCACAGACCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCATGGGATATGAGCGATTTTTTATAGTAACTCACTTCCTCTTCACTCATAATATCCATT    >  2:61797/1‑149
                                                                                                                                                       AGTGGAAAAGGCAAGGGGTAATTACTCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATT    <  2:501860/149‑1
                                                                                                                                                        tTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATTA   <  1:542243/148‑1
                                                                                                                                                        GTGTAAAAGGCAAGGGGTAATTACGCCCTAGAGTGCTGACTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTATATGCTTCCTGCCTGAGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATTA   <  1:235292/149‑1
                                                                                                                                                        GTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCGTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATTA   <  2:891045/149‑1
                                                                                                                                                        GTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCCCCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATTA   >  1:335967/1‑149
                                                                                                                                                        GTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGTTGCTTTCCTGGGATATGAGCGATTTTTTTTGGTAAGTCACTTCTTCTTCACTAAGAATATCCATTA   >  2:807785/1‑149
                                                                                                                                                        GTGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCAATTCTTATTCACTAAGAATATACATTA   >  1:52324/1‑149
                                                                                                                                                         TGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCCTTAT  >  1:366419/1‑149
                                                                                                                                                         TGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATTAT  >  1:619054/1‑149
                                                                                                                                                         TGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATTAT  >  1:582784/1‑149
                                                                                                                                                         TGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATTAT  >  1:734303/1‑149
                                                                                                                                                         TGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACCAAGAATATCCATTAT  >  2:281863/1‑149
                                                                                                                                                         TGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCAC                             <  1:527568/122‑1
                                                                                                                                                         TGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCAC                             >  2:527568/1‑122
                                                                                                                                                         TGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAAATCACTTCTTCTTCACTAAGAATATCCATTAT  >  1:708758/1‑149
                                                                                                                                                         TGTAAAAGGCAAGGGGTAAATAAGGCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGTGCACCTTTTTTTATGCGTCCTTCCTGAGATATGAGCGATTTTTTATAGTATCTCACTTCTTCTTCACTAAGAAGATCCATTAg  <  2:458138/149‑2
                                                                                                                                                                                                                                                                                                               
CCCAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCAGTTGTTGCAAAATCAGCACTGTGGGGCGTAATTACCCCTTGCCTTTTACACTGCTGATAAAGGTGGAACGGGCAGATGTCGATCCCAGGCGTTCAGCTTCATCAAGCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_pae_pgi/4249809‑4249656
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcagtGTAAAAGGCAAGGGGTAATTACGCCCCACAGTGCTGATTTTGCAACAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATTAT  >  NC_000913_3_pae_pgi/4249717‑4249864

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.