| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 389,707 | Δ10,497 bp | [hemB]–[ddlA] | [hemB], yaiT, insF‑2, insE‑2, yaiT, iprA, ampH, sbmA, yaiW, yaiY, yaiZ, [ddlA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 389707 | 400203 | 10497 | 46 [0] | [0] 46 | [hemB]–[ddlA] | [hemB],yaiT,insF‑2,insE‑2,yaiT,iprA,ampH,sbmA,yaiW,yaiY,yaiZ,[ddlA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 389706 | 0 (0.000) | 46 (1.280) | 39/160 | 0.1 | 100% | coding (22/975 nt) | hemB | porphobilinogen synthase |
| ? | NC_000913 | 400204 = | 0 (0.000) | coding (720/1095 nt) | ddlA | D‑alanine‑‑D‑alanine ligase A | |||||
GGCAACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389627‑389706‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACGATCACTTTATGATC > NC_000913/400204‑400281 GGCAACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGT < 1:76117/81‑1GGCAACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGT < 2:76118/81‑1GGCAACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGT > 2:76437/1‑81 GCAACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTT < 1:76119/81‑1 CAACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTG > 1:76445/1‑81 CAACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTG > 1:76457/1‑81 AACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGC > 1:76436/1‑81 ACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCG < 2:76120/81‑1 ACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCG > 2:76454/1‑81 CACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCG > 1:76446/1‑80 GTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTT > 1:76464/1‑81 TTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTG < 1:76121/81‑1 TTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTG > 1:76463/1‑81 TAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGC > 2:76452/1‑81 AAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCC > 1:76438/1‑81 AGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCC < 1:76123/81‑1 AGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCC < 2:76122/80‑1 TAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAA > 1:76450/1‑81 TGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGC < 1:76124/81‑1 GTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCG > 2:76443/1‑81 TGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCA > 2:76453/1‑81 CTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGA > 2:76455/1‑81 TTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTC < 1:76126/78‑1 TTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTC < 2:76125/78‑1 TCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATC > 1:76462/1‑81 CAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGAT < 2:76127/79‑1 AAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTC < 2:76128/81‑1 CATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACG < 1:76129/81‑1 GCAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGA > 1:76468/1‑81 CAGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGAT < 1:76130/81‑1 AGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATC < 1:76131/81‑1 AGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATC < 1:76132/81‑1 AGCGCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATC > 2:76451/1‑81 GCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCT > 1:76476/1‑81 GCAGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCT > 1:76461/1‑81 AGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTG > 1:76481/1‑81 AGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTG > 1:76467/1‑81 AGGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTG > 1:76473/1‑81 GGAGATTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGC > 2:76449/1‑81 TTTGCGCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAAC < 2:76061/81‑1 GCAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACGATCA > 2:76460/1‑81 CAGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACGATCAC > 2:76456/1‑81 AGGCGACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACGATCACT > 1:76472/1‑81 GACGAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACGATCACTTTAT < 1:76091/81‑1 GAGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACGATCACTTTATGAT > 1:76459/1‑81 AGGTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACGATCACTTTATGATC > 1:76474/1‑81 GGCAACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389627‑389706‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACGATCACTTTATGATC > NC_000913/400204‑400281 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |