| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 389,707 | Δ10,497 bp | [hemB]–[ddlA] | [hemB], yaiT, insF‑2, insE‑2, yaiT, iprA, ampH, sbmA, yaiW, yaiY, yaiZ, [ddlA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 389707 | 400203 | 10497 | 46 [0] | [0] 46 | [hemB]–[ddlA] | [hemB],yaiT,insF‑2,insE‑2,yaiT,iprA,ampH,sbmA,yaiW,yaiY,yaiZ,[ddlA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 389706 | 0 (0.000) | 46 (1.280) | 39/160 | 0.1 | 100% | coding (22/975 nt) | hemB | porphobilinogen synthase |
| ? | NC_000913 | 400204 = | 0 (0.000) | coding (720/1095 nt) | ddlA | D‑alanine‑‑D‑alanine ligase A | |||||
TTCGCGCCATCTTCGTCAATGTACTTGGTGTCGTAGGCATAGAAATCGCTGGTGAGTACGATCTCTCCACAGGTGCTGGCTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACGATCACTTTATGATC > NC_000913/400124‑400281 | ggcaacaccaggtcgttaaggctaagtgttgtctcttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggt < 1:76117‑M2/1‑1 (MQ=255)ggcaacaccaggtcgttaaggctaagtgttgtctcttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggt < 2:76118‑M2/1‑1 (MQ=255)ggcaacaccaggtcgttaaggctaagtgttgtctcttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggt > 2:76437‑M2/81‑81 (MQ=255) gcaacaccaggtcgttaaggctaagtgttgtctcttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggtt < 1:76119‑M2/2‑1 (MQ=255) caacaccaggtcgttaaggctaagtgttgtctcttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggTTg > 1:76445‑M2/79‑81 (MQ=255) caacaccaggtcgttaaggctaagtgttgtctcttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggTTg > 1:76457‑M2/79‑81 (MQ=255) aacaccaggtcgttaaggctaagtgttgtctcttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggTTGc > 1:76436‑M2/78‑81 (MQ=255) acaccaggtcgttaaggctaagtgttgtctcttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggTTGCg < 2:76120‑M2/5‑1 (MQ=255) acaccaggtcgttaaggctaagtgttgtctcttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggTTGCg > 2:76454‑M2/77‑81 (MQ=255) caccaggtcgttaaggctaagtgttgtctcttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggTTGCg > 1:76446‑M2/76‑80 (MQ=255) gttaaggctaagtgttgtctcttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGtt > 1:76464‑M2/67‑81 (MQ=255) ttaaggctaagtgttgtctcttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTg < 1:76121‑M2/16‑1 (MQ=255) ttaaggctaagtgttgtctcttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTg > 1:76463‑M2/66‑81 (MQ=255) taaggctaagtgttgtctcttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGc > 2:76452‑M2/65‑81 (MQ=255) aaggctaagtgttgtctcttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGcc > 1:76438‑M2/64‑81 (MQ=255) aggctaagtgttgtctcttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGccc < 1:76123‑M2/19‑1 (MQ=255) aggctaagtgttgtctcttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGcc < 2:76122‑M2/18‑1 (MQ=255) taagtgttgtctcttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGCCCAGaa > 1:76450‑M2/59‑81 (MQ=255) tgttgtctcttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTgc < 1:76124‑M2/27‑1 (MQ=255) gttgtctcttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTgcg > 2:76443‑M2/54‑81 (MQ=255) tgtctcttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCa > 2:76453‑M2/52‑81 (MQ=255) cttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGa > 2:76455‑M2/47‑81 (MQ=255) ttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTc < 1:76126‑M2/33‑1 (MQ=255) ttcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTc < 2:76125‑M2/33‑1 (MQ=255) tcaaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGAtc > 1:76462‑M2/45‑81 (MQ=255) caaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGAt < 2:76127‑M2/36‑1 (MQ=255) aaacatagcgcgcagcgcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGAtctc < 2:76128‑M2/39‑1 (MQ=255) catagcgcgcagcgcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACg < 1:76129‑M2/42‑1 (MQ=255) gcagcgcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGa > 1:76468‑M2/32‑81 (MQ=255) cagcgcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGAt < 1:76130‑M2/51‑1 (MQ=255) agcgcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATc < 1:76131‑M2/52‑1 (MQ=255) agcgcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATc < 1:76132‑M2/52‑1 (MQ=255) agcgcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATc > 2:76451‑M2/30‑81 (MQ=255) gcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCt > 1:76476‑M2/27‑81 (MQ=255) gcaggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCt > 1:76461‑M2/27‑81 (MQ=255) aggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTg > 1:76481‑M2/25‑81 (MQ=255) aggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTg > 1:76467‑M2/25‑81 (MQ=255) aggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTg > 1:76473‑M2/25‑81 (MQ=255) ggagatttgcgcaggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGc > 2:76449‑M2/24‑81 (MQ=255) tttgcgcaggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAAc < 2:76061‑M2/63‑1 (MQ=255) gcaggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACGATCa > 2:76460‑M2/14‑81 (MQ=255) caggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACGATCAc > 2:76456‑M2/13‑81 (MQ=255) aggcgacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACGATCACt > 1:76472‑M2/12‑81 (MQ=255) gacgaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACGATCACTTTAt < 1:76091‑M2/74‑1 (MQ=255) gaggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACGATCACTTTATGAt > 1:76459‑M2/5‑81 (MQ=255) aggTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACGATCACTTTATGATc > 1:76474‑M2/4‑81 (MQ=255) | TTCGCGCCATCTTCGTCAATGTACTTGGTGTCGTAGGCATAGAAATCGCTGGTGAGTACGATCTCTCCACAGGTGCTGGCTTGCGGATTGTCGTTGCCCAGAACTGCGCATTCGATCTCACGACCTTTGATCCCTTGCTCAACGATCACTTTATGATC > NC_000913/400124‑400281 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |