| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 389,707 | Δ10,497 bp | [hemB]–[ddlA] | [hemB], yaiT, insF‑2, insE‑2, yaiT, iprA, ampH, sbmA, yaiW, yaiY, yaiZ, [ddlA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 389707 | 400203 | 10497 | 46 [0] | [0] 46 | [hemB]–[ddlA] | [hemB],yaiT,insF‑2,insE‑2,yaiT,iprA,ampH,sbmA,yaiW,yaiY,yaiZ,[ddlA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 389706 | 0 (0.000) | 46 (1.280) | 39/160 | 0.1 | 100% | coding (22/975 nt) | hemB | porphobilinogen synthase |
| ? | NC_000913 | 400204 = | 0 (0.000) | coding (720/1095 nt) | ddlA | D‑alanine‑‑D‑alanine ligase A | |||||
GGCAACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGGCGTTGGATTAAGTCTGTCATGGTCTGCCTGATGTTTGTGGAATCGAGGGGCATAGTATACCTGAAGCAGGGTAGGGA > NC_000913/389627‑389784 | ggCAACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGt < 1:76117‑M1/81‑2 (MQ=255)ggCAACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGt < 2:76118‑M1/81‑2 (MQ=255)ggCAACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGt > 2:76437‑M1/1‑80 (MQ=255) gCAACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGtt < 1:76119‑M1/81‑3 (MQ=255) cAACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttg > 1:76445‑M1/1‑78 (MQ=255) cAACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttg > 1:76457‑M1/1‑78 (MQ=255) aaCACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttgc > 1:76436‑M1/1‑77 (MQ=255) acacCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttgcg < 2:76120‑M1/81‑6 (MQ=255) acacCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttgcg > 2:76454‑M1/1‑76 (MQ=255) cacCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttgcg > 1:76446‑M1/1‑75 (MQ=255) gTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttgcggattgtcgtt > 1:76464‑M1/1‑66 (MQ=255) ttAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttg < 1:76121‑M1/81‑17 (MQ=255) ttAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttg > 1:76463‑M1/1‑65 (MQ=255) tAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgc > 2:76452‑M1/1‑64 (MQ=255) aaGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcc > 1:76438‑M1/1‑63 (MQ=255) aGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgccc < 1:76123‑M1/81‑20 (MQ=255) aGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcc < 2:76122‑M1/80‑19 (MQ=255) tAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcccagaa > 1:76450‑M1/1‑58 (MQ=255) tgttgtCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcccagaactgc < 1:76124‑M1/81‑28 (MQ=255) gttgtCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcccagaactgcg > 2:76443‑M1/1‑53 (MQ=255) tgtCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcccagaactgcgca > 2:76453‑M1/1‑51 (MQ=255) ctTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcccagaactgcgcattcga > 2:76455‑M1/1‑46 (MQ=255) ttCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcccagaactgcgcattc < 1:76126‑M1/78‑34 (MQ=255) ttCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcccagaactgcgcattc < 2:76125‑M1/78‑34 (MQ=255) tCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcccagaactgcgcattcgatc > 1:76462‑M1/1‑44 (MQ=255) cAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcccagaactgcgcattcgat < 2:76127‑M1/79‑37 (MQ=255) aaaCATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcccagaactgcgcattcgatctc < 2:76128‑M1/81‑40 (MQ=255) cATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcccagaactgcgcattcgatctcacg < 1:76129‑M1/81‑43 (MQ=255) gcagcgcagGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcccagaactgcgcattcgatctcacgacctttga > 1:76468‑M1/1‑31 (MQ=255) cagcgcagGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcccagaactgcgcattcgatctcacgacctttgat < 1:76130‑M1/81‑52 (MQ=255) agcgcagGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcccagaactgcgcattcgatctcacgacctttgatc < 1:76131‑M1/81‑53 (MQ=255) agcgcagGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcccagaactgcgcattcgatctcacgacctttgatc < 1:76132‑M1/81‑53 (MQ=255) agcgcagGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcccagaactgcgcattcgatctcacgacctttgatc > 2:76451‑M1/1‑29 (MQ=255) gcagGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcccagaactgcgcattcgatctcacgacctttgatccct > 1:76476‑M1/1‑26 (MQ=255) gcagGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcccagaactgcgcattcgatctcacgacctttgatccct > 1:76461‑M1/1‑26 (MQ=255) agGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcccagaactgcgcattcgatctcacgacctttgatcccttg > 1:76481‑M1/1‑24 (MQ=255) agGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcccagaactgcgcattcgatctcacgacctttgatcccttg > 1:76467‑M1/1‑24 (MQ=255) agGAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcccagaactgcgcattcgatctcacgacctttgatcccttg > 1:76473‑M1/1‑24 (MQ=255) ggAGATTTGCGCAGGCGACGAGGttgcggattgtcgttgcccagaactgcgcattcgatctcacgacctttgatcccttgc > 2:76449‑M1/1‑23 (MQ=255) tttGCGCAGGCGACGAGGttgcggattgtcgttgcccagaactgcgcattcgatctcacgacctttgatcccttgctcaac < 2:76061‑M1/81‑64 (MQ=255) gcAGGCGACGAGGttgcggattgtcgttgcccagaactgcgcattcgatctcacgacctttgatcccttgctcaacgatca > 2:76460‑M1/1‑13 (MQ=255) cAGGCGACGAGGttgcggattgtcgttgcccagaactgcgcattcgatctcacgacctttgatcccttgctcaacgatcac > 2:76456‑M1/1‑12 (MQ=255) aGGCGACGAGGttgcggattgtcgttgcccagaactgcgcattcgatctcacgacctttgatcccttgctcaacgatcact > 1:76472‑M1/1‑11 (MQ=255) gacgaGGttgcggattgtcgttgcccagaactgcgcattcgatctcacgacctttgatcccttgctcaacgatcactttat < 1:76091‑M1/81‑75 (MQ=255) gaGGttgcggattgtcgttgcccagaactgcgcattcgatctcacgacctttgatcccttgctcaacgatcactttatgat > 1:76459‑M1/1‑4 (MQ=255) aGGttgcggattgtcgttgcccagaactgcgcattcgatctcacgacctttgatcccttgctcaacgatcactttatgatc > 1:76474‑M1/1‑3 (MQ=255) | GGCAACACCAGGTCGTTAAGGCTAAGTGTTGTCTCTTCAAACATAGCGCGCAGCGCAGGAGATTTGCGCAGGCGACGAGGGCGTTGGATTAAGTCTGTCATGGTCTGCCTGATGTTTGTGGAATCGAGGGGCATAGTATACCTGAAGCAGGGTAGGGA > NC_000913/389627‑389784 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |