New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 198486	40 (0.610)	6 (0.100)	5/256	NT	15.0%	coding (3992/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 199110	29 (0.460)					coding (4616/26049 nt)	PP_0168	putative surface adhesion protein

GTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/198335‑198486 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTTGTTGGTCAGCGTGATGGTGTAGGTGATCTCGCCGCCTTCGGTGACCGACGGAGTGGCAGTCAGCTTGGCCACCACCTCGTCGAGGGTGTCGGTGACATCCAC  <  NC_002947/199110‑198965                                                                                                                                                                                                                                                                                                            GTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGC                                                                                                                                                       <  4:338583/149‑1    GTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCTTCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAG                                                                                                                                                     <  5:211474/148‑1    GTGGCCAAACTGACTGCCACCCCTTCGCTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGC                                                                                                                                                    >  4:178594/1‑149                        CCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAG                                                                                                                                                     <  5:366564/128‑1                        CCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAG                                                                                                                                                     >  6:366564/1‑128                                                                                                           AGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTTGTTGGTCAGCGTGATGGTGTAGGTGATCTCGCCGCCTTCGGTGACCGACGGAGTGGCAG                                             >  8:373380/1‑149                                                                                                                   TTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTTGTTGGTCAGCGTGATG                                                                                        >  8:67594/1‑98                                                                                                                     CAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCTTGAAGTACAGCTCCGAGTGGTTATTGATCGTCAGACAGTCTTTGTTGGTCAGCGTGATGTTGTAGGTGATATCGCCGCATTCCGTCACCCACGGAGTGGAAATAAGCTTGGC                                   >  1:137905/1‑149                                                                                                                     CAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTTGTTGGTCAGCGTGATGGTGTAGGTGATCTCGCCGCCTTCGGTGACCGACGGAGTGGCAGTCAGCTTG                                     <  7:373380/147‑1                                                                                                                      AAGCTGACCGATGGCACTACTGTCGTCGTGGCAGCTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTTGTTGGTCAGCGTGATGGTGTAGGTGATCTCGCCGCCTTCGGTGACCGACTGAGTG                                                 <  7:340501/134‑1                                                                                                                         CTGACCGACGGCACCACTGTCGTCGTGGCAGCTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTTGTTGGTCAGGGTGATGGTGTAGGTGATCTCACCGCCTTCGGTCACCGAAGGGGTGGCAGTCAGCTTGGCCAC                                >  2:240976/1‑148                                                                                                                                                      AGCTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTTGTTGGTCAGCGTGATGGTGTAGGTGATCTCGCCGCCTTCGGTGACCGACGGAGTGGCAGTCAGCTTGGCCACCACCTCGTCGAGGGTGTCGGTGACATCCAC  <  1:331004/149‑1                                                                                                                                                                                                                                                                                                            GTGGTGGCCAAACTGACTGCCACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAATAACCACTCGGAGCTGTACTTCAAGCTGACCGATGGCACTACTGTCGTCGTGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/198335‑198486 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcTTGAAGTACAGCTCCGAGTGGTTATTGATCGGCAGACCGTCTTTGTTGGTCAGCGTGATGGTGTAGGTGATCTCGCCGCCTTCGGTGACCGACGGAGTGGCAGTCAGCTTGGCCACCACCTCGTCGAGGGTGTCGGTGACATCCAC  <  NC_002947/199110‑198965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.