New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1294685 =	98 (1.510)	8 (0.130)	8/250	NT	8.2%	coding (166/465 nt)	slyB	outer membrane lipoprotein
	?	NC_002947	1294721 =	87 (1.410)					coding (202/465 nt)	slyB	outer membrane lipoprotein

GGGTCAAGCCTTCTTCTGCTGCGGAACCCGCCAAGCCACCGGCCACGGCACCGATCACGGCAGCCACGATGCTGCCACGGCCACCGCCCACGGCGCTGCCGGCTACACCGCCCACGATGGCACCAGCACCGCCGCCAATCGGGGTCTTGGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1294838‑1294685 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtgccATCGTGGGCGGTGTAGCCGGCAGCGCCGTGGGCGGTGGCCGTGGCAGCATCGTGGCTGCCGTGATCGGTGCCGTGGCCGGTGGCTTGGCGGGTTCCGCAGCAGAAGAAGGCTTGACCCGTACCCAAGGTGTCGAAATTACCGTTCGT  >  NC_002947/1294721‑1294867                                                                                                                                                                                                                                                                                                               GGGTCAAGCCTTCTTCTGCTGCGGAACCCGCCAAGCCACCGGCCACGGCACCGATCACGGCAGCCACGATGCTGCCACGGCCACCGCCCACGGCGCTGCCGGCTACACCGCCCACGATGGCACCAGCACCGCCGCCAATCGGGGTCTTG                                                                                                                                                          <  1:31335/149‑1  GGTCAAGCCTTCTTCTGCTGCGGAACCCGCCAAGCCACCGGCCACGGCACCGATCACGGCAGCCACGATGCTGCCACGGCCACCGCCCACGGCGCTGCCGGCTACACCGCCCACGATGGCACCAGCACCGCCGCCAATCGGGGTCTTGG                                                                                                                                                         <  8:18298/149‑1   GTCAAGCCTTCTTCTGCTGCGGAACCCGCCAAGCCACCGGCCACGGCACCGATCACGGCAGCCACGATGCTGCCACGGCCACCGCCCACGGCGCTGCCGGCTACACCGCCCACGATGGCACCAGCACCGCCGCCAATCGGGGTCTTGGT                                                                                                                                                        >  7:87479/1‑149                                                                                                                 CACGATGGCACCAGCACCGCCGCCAATCGGNGTCTTGGTGCCCTCGTGGGCGGTGTAGCCGGCAGCGCCGTGGGCGGTGGCCGTGGCAGCATCGTGGCTGCCGTGATCGGTGCCGTGGCCGGTGGCTTGGCGGGTTCCGCAGCAGAAG                                           >  1:38125/1‑148                                                                                                                  ACGATGGCACCAGCACCGCCGCCAATCGGGGTCTTGGTGCCATCGTGGGCGGTGTAGCCGGCAGCGCCGTGGGCGGTGGCCGTGGCAGCATCGTGGCTGCCGTGATCGGTGCCGTGGCCGGTGGCTTGGCGGGTTCCGCAGCAGAAG                                           >  4:190993/1‑147                                                                                                                     ATGGCACCAGCACCGCCGCCAATCGGGGTCTTGGTGCCATCGTGGGCGGTGTAGCCGGCAGCGCCGTGGGCGGTGGCCGTGGCAGCATCGTGGCTGCCGTGATCGGTGCCGTGGCCGGTGGCTTGGCGGGTTCCGCAGCAGAAGAAGGC                                      >  2:268932/1‑149                                                                                                                      TGGCACCAGCACCGCCGCCAATCGGGGTCTTGGTGCCATCGTGGGCGGTGTAGCCGGCAGCGCCGTGGGCGGTGGCCGTGGCAGCATCGTGGCTGCCGTGATCGGTGCCGTGGCCGGTGGCTTGGCGGGTTCCGCAGCAGAAGAAGGCT                                     >  3:390906/1‑149                                                                                                                         CACCAGCACCGCCGCCAATCGGGGTCTTGGTGCCATCGTGGGCGGTGTAGCCGGCAGCGCCGTGGGCGGTGGCCGTGGCAGCATCGTTGCTGCCGTGATAGGTGCCGTGGCCGGTGGCTTGGCGGGGTCCGCAGCCGAATAAAGCTTGg                                  >  2:381649/1‑148                                                                                                                          ACCAGCACCGCCGCCAATCGGGGTCTTGGTGCCATCGTGGGCGGTGTAACCGGCAGCGCCGTGGGCGGTGGCCGTGGCAGCATCGTGGCTGCCGTGATCGGTGCCGTGGCCGGTGGCTTGGCGGGTTCCGCAGCAGAAGAAGGCTTGAC                                 >  5:408275/1‑149                                                                                                                                ACCGCCGCCAATCGGGGTCTTGGTGCCATCGTGGGCGGTGTAACCGGCAGCGCCGTGGGCGGTGGCCGTGGCAGCATCGTGGCTGCCGTGATCGGTGCCGTGGCCGGTGGCTTGGCGGGTTCCGCAGCAGAAGAAGGCTTGACCCGTAC                           <  6:408275/149‑1                                                                                                                                      GCCAATCGGGGTCTTGGTGCCATCGTGGGCGGTGTAGCCGGCAGCGCCGTGGGCGGTGGCCGTGGCAGCATCGTGGCTGCCGTGATCGGTGCCGTGGCCGGTGGCTTGGCGGGTTCCGCAGCAGAAGAAGGCTTGACCCGTACCCAAGG                     <  1:268932/149‑1                                                                                                                                                   TTGGTGCCATCGTGGGCGGTGTAGCCGGCAGCGCCGTGGGCGGTGGCCGTGGCAGCATCGTGGCTGCCGTGATCGGTGCCGTGGCCGGTGGCTTGGCGGGTTCCGCAGCAGAAGAAGGCTTGACCCGTACCCAAGGTGTCGAAATTACC        <  3:190993/149‑1                                                                                                                                                     GGTGCCATCGTGGGCGGTGTAGCCGGCAGCGCCGTGGGCGGTGGCCGTGGCAGCATCGTGGCTGCGGTGATCGGTGCCGTGGCCGGTGGCTTGGCGGGTTCCGCAGCAGAAGAAGGCTTGACCCGTACCCAAGGTGTCGAAATTACCGT      >  1:121826/1‑149                                                                                                                                                      GTGCCATCGTGGGCGGTGTAGCCGGCAGCGCCGTGGGCGGTGGCCGTGGCAGCATCGTGGCTGCCGTGATCGGTGCCGTGGCCGGTGGCTTGGCGGGTTCCGCAGCAGAAGAAGGCTTGACCCGTACCCAAGGTGTCGAAATTACCGTT     >  5:329026/1‑149                                                                                                                                                       TGCCATCGTGGGCGGTGTAGCCGGCAGCGCCGTGGGCGGTGGCCGTGGCAGCATCGTGGCTGCCGTGATCGGTGCCGTGGCCGGTGGCTTGGCGGGTTCCGCAGCAGAAGAAGGCTTGACCCGTACCCAAGGTGTCGAAATTACCGTTC    <  6:78170/149‑1                                                                                                                                                          CATCGTGGGCGGTGTAGCCGGCAGCGCCGTGGGCGGTGGCCGTGGCAGCATCGTGGCTGCCGTGATCGGTGCCGTGGCCGGTGGCTTGGCGGGTTCCGCAGCAGAAGAAGGCTTGACCCGTACCCAAGGTGTCGAAATTACCGTTCGT  >  8:122488/1‑148                                                                                                                                                                                                                                                                                                               GGGTCAAGCCTTCTTCTGCTGCGGAACCCGCCAAGCCACCGGCCACGGCACCGATCACGGCAGCCACGATGCTGCCACGGCCACCGCCCACGGCGCTGCCGGCTACACCGCCCACGATGGCACCAGCACCGCCGCCAATCGGGGTCTTGGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1294838‑1294685 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtgccATCGTGGGCGGTGTAGCCGGCAGCGCCGTGGGCGGTGGCCGTGGCAGCATCGTGGCTGCCGTGATCGGTGCCGTGGCCGGTGGCTTGGCGGGTTCCGCAGCAGAAGAAGGCTTGACCCGTACCCAAGGTGTCGAAATTACCGTTCGT  >  NC_002947/1294721‑1294867

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.