New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1661709 =	82 (1.260)	5 (0.080)	4/250	NT	6.4%	coding (381/468 nt)	PP_1456	membrane protein
	?	NC_002947	1661749 =	69 (1.120)					coding (421/468 nt)	PP_1456	membrane protein

GAAGGCATCCGGGGCCGCGCCAGGCTAGGCGCCACCCGCTGAAAAAGGACCGCTATTCTACACCATCAACCGGCCACGGCGGCCCGCCGGGCGCGAAATGCCATGGCCAGCCACACCGCGGTTACACCGGCGAATTTCGAGGCCATCGCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1661861‑1661709 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcggtgTGGCTGGCCATGGCATTTCGCGCCCGGCGGGCCGCCGTGGCCGGTTGATGGTGTAGAATAGCGGTCCTTTTTCAGCGGGTGGCGCCTAGCCTGGCGCGGCCCCGGATGCCTTCGAGGACCTGAAATGACCCGTATCGGAACCCCA  >  NC_002947/1661749‑1661893                                                                                                                                                                                                                                                                                                            GAAGGCATCCGGGGCCGCGCCAGGCTAGGCGCCACCCGCTGAAAAAGGACCGCTATTCTACACCATCAACCGGCCACGGCGGCCCGCCGGGCGCGAAATGCCATGGCCAGCCACACCGCGGTTACACCGGCGAATTTCGAGGCCATC                                                                                                                                                         <  5:300821/147‑1   AGGCATCCGGGGCCGCGCCAGGCTAGGCGCCACCCGCTGAAAAAGGACCGCTATTCTACACCATCAACCGGCCACGGCGGCCCGCCGGGCGCGAAATGCCATGGCCAGCCACACCGCGGTTACACCGGCGAATTTCGAGGCCATCGCGG                                                                                                                                                     >  7:115834/1‑149                                                                                                               CCACACCGCGGTTACACCGGCGAATTTCGAGGCCATCGCGGTGTGGCTGGCCATGGCATTTCGCGCCCGGCGGGCCGCCGTGGCCGGTTGATGGTGTAGAATAGCGGTCCTTTTTCAGCGGGTGGCGCCTAGCCTGGCGCGGCCCCGGA                                         >  5:9699/1‑149                                                                                                               CCACACCGCGGTTACACCGGCGAATTTCGAGGCCATCGCGGTGTGGCTGGCCATGGCATTTCGCGCCCGGCGGGCCGCCGTGGCCGGTTGATGGTGTAGAATAGCGGTCCTTTTTCAGCGGGTGGCGCCTAGCCTGGCGCGGCCCCGGA                                         >  8:275225/1‑149                                                                                                                  CACCGCGGTTACACCGGCGAATTTCGAGGCCATCGCGGTGTGGATGGCCATGGAATTTCTATCCAGTCAAGAATCCGTGGCCGGTTGATGGTGTAGAATAGCGGTCCTTTTTCAGCGGGTGGCGCCTAGCCTGGCGCGGCCCCGGATGC                                      >  6:87457/1‑149                                                                                                                          TTACACCGGCGAATTTCGAGGCCATCGCGGTGTGGCTGGCCATGGCATTTCGCGCCCGGCGGGCCGCCGTGGCCGGTTGATG                                                                                                 >  1:109908/1‑82                                                                                                                          TTACACCGGCGAATTTCGAGGCCATCGCGGTGTGGCTGGCCATGGCATTTCGCGCCCGGCGGGCCGCCGTGGCCGGTTGATG                                                                                                 <  2:109908/82‑1                                                                                                                                                   CGCGGTGTGGCTGGCCATGGCATTTCGCGCCCGGCGGGCCGCCGTGGCCGGTTGATGGTGTAGAATAGCGGTCCTTTTTCAGCGGGTGGCGCCTAGCCTGGCGCGGCCCCGGATGCCTTCGAGGACCTGAAATGACCCGTATCGGAACC     <  4:360785/149‑1                                                                                                                                                      GGTGTGGCTGGCCATGGCATTTCGCGCCCGGCGGGCCGCCGTGGCCGGTTGATGGTGTAGAATAGCGGTCCTTTTTCAGCGGGTGGCGCCTAGCCTGGCGCGGCCCCGGATGCCTTCGAGGACCTGAAATGACCCGTATCGGAACCCCA  <  6:193654/149‑1                                                                                                                                                      GGTGTGGCTGGCCATGGCATTTCGCGCCCGGCGGGCCGCCGTGGCCGGTTGATGGTGTAGAATAGCGGTCCTTTTTCAGCGGGTGGCGCCTAGCCTGGCGCGGCCCCGGATGCCTTCGAGGACCTGAAATGACCCGTATCG          <  1:274071/141‑1                                                                                                                                                      GGTGTGGCTGGCCATGGCATTTCGCGCCCGGCGGGCCGCCGTGGCCGGTTGATGGTGTAGAATAGCGGTCCTTTTTCAGCGGGTGGCGCCTAGCCTGGCGCGGCCCCGGATGCCTTCGAGGACCTGAAATGACCCGTATCG          >  2:274071/1‑141                                                                                                                                                                                                                                                                                                            GAAGGCATCCGGGGCCGCGCCAGGCTAGGCGCCACCCGCTGAAAAAGGACCGCTATTCTACACCATCAACCGGCCACGGCGGCCCGCCGGGCGCGAAATGCCATGGCCAGCCACACCGCGGTTACACCGGCGAATTTCGAGGCCATCGCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1661861‑1661709 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcggtgTGGCTGGCCATGGCATTTCGCGCCCGGCGGGCCGCCGTGGCCGGTTGATGGTGTAGAATAGCGGTCCTTTTTCAGCGGGTGGCGCCTAGCCTGGCGCGGCCCCGGATGCCTTCGAGGACCTGAAATGACCCGTATCGGAACCCCA  >  NC_002947/1661749‑1661893

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.