| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1693906 = | 63 (0.970) | 4 (0.070) | 4/248 | NT | 6.8% | coding (375/507 nt) | PP_1489 | CheW domain‑containing protein |
| ? | NC_002947 | 1693965 = | 51 (0.830) | coding (434/507 nt) | PP_1489 | CheW domain‑containing protein | |||||
GAAGCGGAAGAAACGCTGTTCGTTCATGTAGGCATCCCTGTCGGGTCTTGCGTGTACAGCAATGCGTGCACGGTGTCGGGCAGCAGGTCATTGACTTCGATGCGCTGCAGCAGGCCTTGGGCATCCTGGCGCACCGGGCCCAGATAAGGCGCATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1694061‑1693906‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcatcgAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGACGTGGAGTCGGTGGGCGCGCCCATGGTC > NC_002947/1693965‑1694112 GAAGCGGAAGAAACGCTGTTCGTTCATGTAGGCATCCCTGTCGGGTCTTGCGTGTACAGCAATGCGTGCACGGTGTCGGGCAGCAGGTCATTGACTTCGATGCGCTGCAGCAGGCCTTGGGCATCCTGGCGCACCGGGCCCAGATAAGG < 1:58289/149‑1 CGGAAGAAACGCTGTTCGTTCATGTAGGCATCCCTGTCGGGTCTTGCGTGTACAGCAATGCGTGCACGGTGTCGGGCAGCAGGTCATTGACTTCGATGCGCTGCAGCAGGCCTTGGGCATCCTGGCGCACCGGGCCCAGATAAGGCGac > 8:341270/1‑147 TTCGATGCGCTGCAGCAGGCCTTGGGCATCCTGGCGCACCGGGCCCAGATAAGGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTC > 1:234089/1‑149 TCGATGCGCTGCAGCAGTCCTTGGGCATCCTGGCGCACCGGGCCCAGATAAGGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAAC < 7:348878/136‑1 TCGATGCGCTGCAGCAGGCCTTGGGCATCCTGGCGCACCGGGCCCAGATAAGGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAAC > 8:348878/1‑136 AGCAGGCCTTGGGCATCCTGGCGCACCGGGCCCAGATAAGGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGC < 2:234089/149‑1 TCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGACGTGGAGTCGGTGGGCGCGCCCATGG < 1:149481/149‑1 TCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGACGTGGAGTCGGTGGGCGCGCCCATGG < 3:315783/149‑1 CGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGACGTGGAGACGGTGGGCGCGCCCATGGT > 6:231803/1‑149 GAAGTCAATGACCAGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGACGTGGAGTCGGTGGGCGCGCCCATGGTC < 6:208492/149‑1 GAAGCGGAAGAAACGCTGTTCGTTCATGTAGGCATCCCTGTCGGGTCTTGCGTGTACAGCAATGCGTGCACGGTGTCGGGCAGCAGGTCATTGACTTCGATGCGCTGCAGCAGGCCTTGGGCATCCTGGCGCACCGGGCCCAGATAAGGCGCATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1694061‑1693906‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcatcgAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGACGTGGAGTCGGTGGGCGCGCCCATGGTC > NC_002947/1693965‑1694112 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |