New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1693906 =63 (0.970)4 (0.070) 4/248 NT 6.8% coding (375/507 nt) PP_1489 CheW domain‑containing protein
?NC_002947 1693965 = 51 (0.830)coding (434/507 nt) PP_1489 CheW domain‑containing protein

GCCTGCAGCTTGGCCTGATCCTGGAGCAGGCCACCGAAACCCTGCGTTGCCAACCGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGACGTGGAGTCGGTGGGCGCGCCCATGGTC  >  NC_002947/1693818‑1694112
                                                                                                                                                    |                                                                                                                                                   
gcCTGCAGCTTGGCCTGATCCTGGAGCAGGCCACCGAAACCCTGCGTTGCCAACCGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATTGaa                                                                                                                                                    <  7:382594/149‑1 (MQ=255)
gcCTGCAGCTTGGCCTGATCCTGGAGCAGGCCACCGAAACCCTGCGTTGCCAACCGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGaa                                                                                                                                                    <  2:90158/149‑1 (MQ=255)
gcCTGCAGCTTGGCCTGATCCTGGAGCAGGCCACCGAAACCCTGCGTTGCCAACCGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGaa                                                                                                                                                    <  5:262766/149‑1 (MQ=255)
 gaaacgctgttcgttcatgtaggcatccctgtcgggtcttgcgtgtacagcaatgcgtgcacggtgtcgggcagcaggtcattgacttCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGaa                                                                                                                                                    >  1:234089‑M1/89‑149 (MQ=255)
     cAGCTTGGCCTGATCCTGGAGCAGGCCACCGAAACCCTGCGTTGCCAACCGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCaa                                                                                                                                               <  6:209868/149‑1 (MQ=255)
         ttGGCCTGAACCTGGAGCAGGCCACCGAACCACTCCGTTGCCAACCGGACCAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCATTAACTGGTCCAGGTGCGCCACGATGCACAAGGCCTGCTCCAGAGCATCCAAGTCAAAGAc                                                                                                                                           >  2:205786/1‑149 (MQ=255)
             gttcatgtaggcatccctgtcgggtcttgcgtgtacagcaatgcgtgcacggtgtcgggcagcaggtcattgacttCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGa                                                                                                                                                     >  8:348878‑M1/77‑136 (MQ=255)
             gttcatgtaggcatccctgtcgggtcttgcgtgtacagcaatgcgtgcacggtgtcgggcagcaggtcattgacttCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGACTGCTGCAGCGCATCGa                                                                                                                                                     <  7:348878‑M1/60‑1 (MQ=255)
              cTGATCCTGGAGCAGGCCACCGAAACCCTGCGTTGACAACCGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACctgct                                                                                                                                      >  7:14310/1‑149 (MQ=255)
               tGATCCTGGAGCAGGCCACCGAAACCCTGCGTTGCCAACCGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACctgctg                                                                                                                                     >  1:147318/1‑149 (MQ=255)
                 aTCCTGGAGCAGGCCACCGAAACCCTGCGTTGCCAACCGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGcc                                                                                                                                   >  5:410823/1‑149 (MQ=255)
                  tCCTGGAGCAGGCCACCGAAACCCTGCGTTGCCAACCGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGcc                                                                                                                                   <  5:26642/148‑1 (MQ=255)
                   ccTGGAGCAGGCCACCGAAACCCTGCGTTGCCAACCGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGccc                                                                                                                                  >  3:57365/1‑148 (MQ=255)
                     tGGAGCAGGCCACCGAAACCCTGCGTTCCCAAACGGACGAGTTCCAGGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGa                                                                                                                                >  1:89181/1‑149 (MQ=255)
                            ggCCACCGAAACCCTGCGTTGCCAACCGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTg                                                                                                                         >  1:218543/1‑148 (MQ=255)
                              ccACCGAAACCCTGCGTTGCCAACCGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCAc                                                                                                                      <  1:113514/149‑1 (MQ=255)
                                aCCGAAACCCTGCGTTGCCAACCGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACg                                                                                                                     >  4:216686/1‑148 (MQ=255)
                                       cccTGCGTTGCCAACCGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAACGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTg                                                                                                             >  1:151063/1‑149 (MQ=255)
                                        ccTGCGTTGCCAACCGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTg                                                                                                             >  4:300866/1‑148 (MQ=255)
                                        ccTGCGTTGCCAACCGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTg                                                                                                             >  7:231265/1‑148 (MQ=255)
                                         cTGCGTTGCCAACCGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGaa                                                                                                                                                    >  3:20406/1‑108 (MQ=255)
                                         cTGCGTTGCCAACCGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGaa                                                                                                                                                    <  4:20406/108‑1 (MQ=255)
                                            cGTTGCCAACCGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTac                                                                                                          <  2:147318/147‑1 (MQ=255)
                                               tGCCAACCGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGc                                                                                                      >  6:33016/1‑148 (MQ=255)
                                                    aCCGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGAcc                                                                                                <  4:30326/149‑1 (MQ=255)
                                                     ccGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAg                                                                                                   >  4:294331/1‑145 (MQ=255)
                                                     ccGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAg                                                                                                   <  3:294331/145‑1 (MQ=255)
                                                     ccGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGAccc                                                                                               >  6:279260/1‑149 (MQ=255)
                                                       ggACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGa                                                                                             <  5:33016/149‑1 (MQ=255)
                                                       ggACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGa                                                                                             <  5:12529/149‑1 (MQ=255)
                                                           gAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAg                                                                                          <  3:216686/148‑1 (MQ=255)
                                                             gTTCCAGCCCTATGGGGTGGACACAGGCGATGCTCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGa                                                                                       <  2:30921/149‑1 (MQ=255)
                                                             gTTCCAGCCCTATGGGGTGGACACAGGCGATGCTCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGa                                                                                       >  1:30921/1‑149 (MQ=255)
                                                             gTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGa                                                                                       >  6:62397/1‑149 (MQ=255)
                                                                 cAGACCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGc                                                                                    <  8:165052/148‑1 (MQ=255)
                                                                    gCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTa                                                                                 <  3:360643/149‑1 (MQ=255)
                                                                     cccTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTAc                                                                                <  4:57365/149‑1 (MQ=255)
                                                                     cccTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTAc                                                                                <  8:14310/149‑1 (MQ=255)
                                                                       cTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACAt                                                                              >  7:231182/1‑149 (MQ=255)
                                                                          tGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATgaac                                                                          >  1:330826/1‑149 (MQ=255)
                                                                                       ttcgatgcgctgcagcaggccttgggcatcctggcgcaccgggcccagataaggcgcatcgAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTttc                                                              >  1:234089‑M2/62‑149 (MQ=255)
                                                                                        tcgatgcgctgcagcagtccttgggcatcctggcgcaccgggcccagataaggcgcatcgAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATgaac                                                                          <  7:348878‑M2/76‑1 (MQ=255)
                                                                                        tcgatgcgctgcagcaggccttgggcatcctggcgcaccgggcccagataaggcgcatcgAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATgaac                                                                          >  8:348878‑M2/61‑136 (MQ=255)
                                                                                            gtCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCg                                                         >  8:341270‑M1/3‑149 (MQ=255)
                                                                                                CCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTc                                                     <  1:58289‑M1/149‑1 (MQ=255)
                                                                                                 cTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTa                                                                                                           <  8:125909/94‑1 (MQ=255)
                                                                                                 cTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTa                                                                                                           >  7:125909/1‑94 (MQ=255)
                                                                                                    agcaggccttgggcatcctggcgcaccgggcccagataaggcgcatcgAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTgc                                                 <  2:234089‑M2/101‑1 (MQ=255)
                                                                                                    aTCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGcttctt                                                   <  3:300866/147‑1 (MQ=255)
                                                                                                      cTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTgcgc                                               >  2:389267/1‑149 (MQ=255)
                                                                                                       tGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTgcgc                                               >  7:273711/1‑148 (MQ=255)
                                                                                                        gggCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGAt                                                                                      <  6:116245/108‑1 (MQ=255)
                                                                                                        gggCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGAt                                                                                      >  5:116245/1‑108 (MQ=255)
                                                                                                            ccGGTGCGCCAGGATGCCCAAGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTa                                        <  2:330826/149‑1 (MQ=255)
                                                                                                                    ccAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCt                                 >  3:187944/1‑149 (MQ=255)
                                                                                                                     cAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTg                                <  6:410823/149‑1 (MQ=255)
                                                                                                                        gATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGAc                             <  8:231265/149‑1 (MQ=255)
                                                                                                                            cccAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGACGTg                          <  8:273711/148‑1 (MQ=255)
                                                                                                                            cccAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGACGTg                          <  1:389267/148‑1 (MQ=255)
                                                                                                                            cccAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGACGTg                          <  5:196110/148‑1 (MQ=255)
                                                                                                                             ccAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGACGTg                          >  4:315783/1‑147 (MQ=255)
                                                                                                                              cAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACAt                                                                              <  8:372550/94‑1 (MQ=255)
                                                                                                                               aaGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGACGTg                          <  7:351583/145‑1 (MQ=255)
                                                                                                                               aaGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGACGTg                          >  8:351583/1‑145 (MQ=255)
                                                                                                                                   ccTGCTGCAGCGCATCGAAGTCAATGACCAGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGACGTGGAGTCGGt                  >  5:208492/1‑149 (MQ=255)
                                                                                                                                        tgcAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGACGTGGAGTCGGTGGgcg             >  4:109663/1‑149 (MQ=255)
                                                                                                                                           aGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGACGTGGAGTCg                    <  2:219415/139‑1 (MQ=255)
                                                                                                                                           aGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGACGTGGAGTCg                    >  1:219415/1‑139 (MQ=255)
                                                                                                                                           aGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGACGTGGAGTCGGTGGgcgcgc          <  5:279260/149‑1 (MQ=255)
                                                                                                                                                 tcgAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGACGTGGAGTCGGTGGGCGCGCCCATgg    <  3:315783‑M2/146‑1 (MQ=255)
                                                                                                                                                 tcgAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGACGTGGAGTCGGTGGGCGCGCCCATgg    <  1:149481‑M2/146‑1 (MQ=255)
                                                                                                                                                  cgAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGACGTGGAGACGGTGGGCGCGCCCATGGt   >  6:231803‑M2/3‑149 (MQ=255)
                                                                                                                                                   gAAGTCAATGACCAGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGACGTGGAGTCGGTGGGCGCGCCCATGGTc  <  6:208492‑M2/148‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GCCTGCAGCTTGGCCTGATCCTGGAGCAGGCCACCGAAACCCTGCGTTGCCAACCGGACGAGTTCCAGCCCTATGGGGTGGACACAGGCGATGCGCCTTATCTGGGCCCGGTGCGCCAGGATGCCCAAGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGCCCGACACCGTGCACGCATTGCTGTACACGCAAGACCCGACAGGGATGCCTACATGAACGAACAGCGTTTCTTCCGCTTCTTGCGCGAGCGTATTGGCCTGGACGTGGAGTCGGTGGGCGCGCCCATGGTC  >  NC_002947/1693818‑1694112

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.