| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1799851 = | 29 (0.450) | 6 (0.110) | 5/218 | NT | 25.6% | intergenic (+21/‑166) | rnhB/dnaEA | ribonuclease HII/DNA polymerase III subunit alpha |
| ? | NC_002947 | 1799939 = | 11 (0.210) | intergenic (+109/‑78) | rnhB/dnaEA | ribonuclease HII/DNA polymerase III subunit alpha | |||||
GACATGGAAGATCCTGTAGCAGTGCTTAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1800021‑1799851‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcgggcgtgcccgcgaagggcTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTGGTGCGGATC > NC_002947/1799939‑1800085 GACATGGAAGATCCTGTAGCAGTGCTTAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAG < 3:15045/149‑1 GAAGATCCTGTAGCAGTGCTTAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGG > 7:52918/1‑149 TCCTGTAGCATTGCTTAACGACACGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGTCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGC < 8:380521/149‑1 CAGTGCTTAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAG < 8:52918/149‑1 ACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGG < 6:41809/146‑1 ACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGG > 5:41809/1‑146 GCCCGCTCCCACAGGTACGGCCCAGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTT > 1:91505/1‑149 CCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTC > 3:365710/1‑148 GCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGC < 4:365710/149‑1 GCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGC < 2:91505/149‑1 cttcGCGGGCACGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGC > 4:99703/5‑149 GAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTG > 2:354005/1‑149 GCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGT < 3:328238/149‑1 cgCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGACGACGGCCT > 4:258474/3‑149 CCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTG > 5:116581/1‑149 CCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTG < 8:177293/149‑1 GCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTGGT > 5:150485/1‑149 GCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCACGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTGGT > 1:100943/1‑149 GGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTGGTGCGGA < 1:354005/149‑1 CTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCAAGCCCTTTACGTTAAGCACTGCTACAGCATCTTCCATCTCGGGTCGCTTCGTTCACCTGCGCGTCCACTCCGAAGTCTCGCTGGTCGACTGCCTGGTGCGGCTC > 2:391070/1‑148 GACATGGAAGATCCTGTAGCAGTGCTTAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1800021‑1799851‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcgggcgtgcccgcgaagggcTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTGGTGCGGATC > NC_002947/1799939‑1800085 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |