| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1799851 = | 29 (0.450) | 6 (0.110) | 5/218 | NT | 25.6% | intergenic (+21/‑166) | rnhB/dnaEA | ribonuclease HII/DNA polymerase III subunit alpha |
| ? | NC_002947 | 1799939 = | 11 (0.210) | intergenic (+109/‑78) | rnhB/dnaEA | ribonuclease HII/DNA polymerase III subunit alpha | |||||
GCTACCCGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAA > NC_002947/1799703‑1799934 | gCTACCCGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCgg < 2:71662/149‑1 (MQ=255) cTACCCGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGc > 8:304348/1‑149 (MQ=255) gagccgcaccaggcagtcgaccagcgagacttcggagtggacgcgcaggtgaacgaagcgacccgagatggaagatgctgtagcagtgcttaacgtaaagggcttgattgtagcctaactaggggctttttttggggctgctttgcag > 2:391070‑M1/148‑148 (MQ=255) tccgcaccaggccgtcgaccagcgagaattcggagtggacgcgcaggtgaacgaagggaaccgacatggaagatcctgtagcagtgcttaacgacaagggcgggattgtagcctaactaggggctttttttggggctgctttgcaGccc < 1:354005‑M1/4‑1 (MQ=255) cccGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGccc < 8:349944/148‑1 (MQ=255) cccGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGcc < 7:304348/147‑1 (MQ=255) ccGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCt > 4:282899/1‑148 (MQ=255) cGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTc > 7:6545/1‑149 (MQ=255) accaggccgtcgaccagcgagaattcggagtggacgcgcaggtgaacgaagggaaccgacatggaagatcctgtagcagtgcttaacgacaagggcgtgattgtagcctaactaggggctttttttggggctgctttgcaGCCCTTcgc > 1:100943‑M1/141‑149 (MQ=255) accaggccgtcgaccagcgagaattcggagtggacgcgcaggtgaacgaagggaaccgacatggaagatcctgtagcagtgcttaacgacaagggcgggattgtagcctaactaggggctttttttggggctgctttgcaGCCCTTcgc > 5:150485‑M1/141‑149 (MQ=255) caggccgtcgaccagcgagaattcggagtggacgcgcaggtgaacgaagggaaccgacatggaagatcctgtagcagtgcttaacgacaagggcgggattgtagcctaactaggggctttttttggggctgctttgcaGCCCTTCGCgg > 5:116581‑M1/139‑149 (MQ=255) caggccgtcgaccagcgagaattcggagtggacgcgcaggtgaacgaagggaaccgacatggaagatcctgtagcagtgcttaacgacaagggcgggattgtagcctaactaggggctttttttggggctgctttgcaGCCCTTCGCgg < 8:177293‑M1/11‑1 (MQ=255) aggccgtcgtccagcgagaattcggagtggacgcgcaggtgaacgaagggaaccgacatggaagatcctgtagcagtgcttaacgacaagggcgggattgtagcctaactaggggctttttttggggctgctttgcaGCCCttcgcgcg > 4:258474‑M1/138‑147 (MQ=255) accagcgagaattcggagtggacgcgcaggtgaacgaagggaaccgacatggaagatcctgtagcagtgcttaacgacaagggcgggattgtagcctaactaggggctttttttggggctgctttgcaGCCCTTCGCGGGCACGCCCGc < 3:328238‑M1/21‑1 (MQ=255) cagcgagaattcggagtggacgcgcaggtgaacgaagggaaccgacatggaagatcctgtagcagtgcttaacgacaagggcgggattgtagcctaactaggggctttttttggggctgctttgcaGCCCTTCGCGGGCACGCCCGctc > 2:354005‑M1/127‑149 (MQ=255) ggCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTca < 2:33549/149‑1 (MQ=255) gcgagaattcggagtggacgcgcaggtgaacgaagggaaccgacatggaagatcctgtagcagtgcttaacgacaagggcgggattgtagcctaactaggggctttttttggggctgctttgcaGCCCTTCGCGGGCGTGcccgcgaag > 4:99703‑M1/125‑145 (MQ=255) gCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCGTGCCCGcgaagg < 6:275482/148‑6 (MQ=255) cGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTcaca < 5:183694/149‑1 (MQ=255) cGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTcaca < 1:87395/149‑1 (MQ=255) gCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTca < 8:345700/142‑1 (MQ=255) gCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTca > 7:345700/1‑142 (MQ=255) gCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGAt < 6:404370/148‑1 (MQ=255) cGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGACCTTCGCGGGCACGCCCGCTCTCACAGGATTCAt > 4:259928/1‑149 (MQ=255) tgaatGGGCGTAGGCCCATTCATCGGCGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCTGGCACGCCCGCTCTCACAGGATTCATc > 3:317026/5‑149 (MQ=255) gTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATc < 6:53303/149‑1 (MQ=255) gggCCTACGCCCATTCATCGGCGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGACCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGt < 3:259928/147‑1 (MQ=255) gggCCTACGCCCATTCATCGGCGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGAGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGt < 6:179861/147‑1 (MQ=255) gCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCg > 1:54138/1‑144 (MQ=255) gCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCg > 1:48180/1‑144 (MQ=255) gCCTACGCCCATTCATCGGCGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCg < 2:48180/143‑1 (MQ=255) gCCTACGCCCATTCATCGGCGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCg < 2:54138/143‑1 (MQ=255) gcaggtgaacgaagggaaccgacatggaagatcctgtagcagtgcttaacgacaagggcgggattgtagcctaactaggggctttttttggggctgctttgcaGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAgc < 4:365710‑M1/46‑1 (MQ=255) gcaggtgaacgaagggaaccgacatggaagatcctgtagcagtgcttaacgacaagggcgggattgtagcctaactaggggctttttttggggccgcttcgcgGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAgc < 2:91505‑M1/46‑1 (MQ=255) aTCGGCGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTa > 5:184069/1‑149 (MQ=255) cGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCtgt < 8:65214/149‑1 (MQ=255) ccTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCt > 1:159664/1‑143 (MQ=255) cGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCg < 3:282899/148‑1 (MQ=255) gCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCgg < 8:6545/148‑1 (MQ=255) gaagatcctgtagcagtgcttaacgacaagggcgggattgtagcctaactaggggctttttttggggctgctttgcaGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCgg > 3:365710‑M1/78‑148 (MQ=255) cccc‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCTGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGc < 4:317026/149‑1 (MQ=255) aagatcctgtagcagtgcttaacgacaagggcgggattgtagcctaactaggggctttttttggggccgcttcgcgGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCTGGGCCGTACCTGTGGGAGCGGGc > 1:91505‑M1/77‑149 (MQ=255) gTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCAt < 6:366201/107‑1 (MQ=255) gTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCAt > 5:366201/1‑107 (MQ=255) cctgtagcagtgcttaacgacaagggcgggattgtagcctaactaggggctttttttggggctgctttgcaGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGt < 6:41809‑M1/75‑1 (MQ=255) cctgtagcagtgcttaacgacaagggcgggattgtagcctaactaggggctttttttggggctgctttgcaGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGt > 5:41809‑M1/72‑146 (MQ=255) gcgggcggCTTGGGAAGCGCGCGAAGGCGGCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTGCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCcg < 6:335829/149‑1 (MQ=255) gcggcTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGGGGGAGCGGGCGTGCCCGCGaa < 6:184069/149‑1 (MQ=255) cGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGGCGt < 4:115589/93‑1 (MQ=255) cGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGt > 3:115589/1‑93 (MQ=255) | GCTACCCGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCC‑GGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAA > NC_002947/1799703‑1799934 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |