| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1799851 = | 29 (0.450) | 6 (0.110) | 5/218 | NT | 25.6% | intergenic (+21/‑166) | rnhB/dnaEA | ribonuclease HII/DNA polymerase III subunit alpha |
| ? | NC_002947 | 1799939 = | 11 (0.210) | intergenic (+109/‑78) | rnhB/dnaEA | ribonuclease HII/DNA polymerase III subunit alpha | |||||
CTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTGGTGCGGATC > NC_002947/1799854‑1800085 | CTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTg < 8:52918‑M1/149‑1 (MQ=255) GCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGACCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCGTGTCGTTAAGCAATGCTACAGGa < 8:380521‑M1/149‑1 (MQ=255) acgcccgctcccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggcTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAgg < 6:41809‑M2/71‑1 (MQ=255) acgcccgctcccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggcTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAgg > 5:41809‑M2/76‑146 (MQ=255) gcccgctcccacaggtacggcccagccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggcCGCGAAGCGGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCtt > 1:91505‑M2/74‑149 (MQ=255) CCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTc > 7:52918‑M1/1‑149 (MQ=255) ccgctcccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggcTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTc > 3:365710‑M2/72‑148 (MQ=255) CTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTc < 3:15045‑M1/149‑1 (MQ=255) acaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCaaaaaa < 8:208404/83‑1 (MQ=255) acaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCaaaaaa > 7:208404/1‑83 (MQ=255) acaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGt > 7:177293/1‑149 (MQ=255) acaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGt < 3:112662/149‑1 (MQ=255) acaGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGt > 5:70452/1‑149 (MQ=255) gATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGAACTGCTACAGGATCTTCCATGTCGGTTccc > 1:195441/1‑149 (MQ=255) cATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTc < 6:70452/148‑1 (MQ=255) gctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggcTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTgc < 4:365710‑M2/103‑1 (MQ=255) gctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggcCGCGAAGCGGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTgc < 2:91505‑M2/103‑1 (MQ=255) gcggTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGTCTGCATAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTc < 2:195441/149‑1 (MQ=255) gcggGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTc > 4:328238/1‑149 (MQ=255) ggggCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCa > 5:67669/1‑149 (MQ=255) cTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATtc > 5:68648/1‑149 (MQ=255) tgtgGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATtct > 7:124284/1‑149 (MQ=255) tgtgGGAGCGGGCGTGCACGCGAATGGCTGCAAAGCAGCCCCAAAAAAAGCCACTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACATGATCTTACATGTCGGTTCCCTTCGTTCACCTGAGCGTCCACTCCGAATtc > 8:201273/1‑148 (MQ=255) cttcgcgggcacgcccgcgaagggcTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGc > 4:99703‑M2/26‑149 (MQ=255) gagcgggcgtgcccgcgaagggcTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTg > 2:354005‑M2/24‑149 (MQ=255) gcgggcgtgcccgcgaagggcTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGt < 3:328238‑M2/128‑1 (MQ=255) cgcgcgaagggcTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGACGACGGCCt > 4:258474‑M2/13‑149 (MQ=255) ccgcgaagggcTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTg < 8:177293‑M2/138‑1 (MQ=255) ccgcgaagggcTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTg > 5:116581‑M2/12‑149 (MQ=255) gcgaagggcTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTGGt > 5:150485‑M2/10‑149 (MQ=255) gcgaagggcTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCACGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTGGt > 1:100943‑M2/10‑149 (MQ=255) gggcTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTGGTGCGGa < 1:354005‑M2/145‑1 (MQ=255) cTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCAAGCCCTTTACGTTAAGCACTGCTACAGCATCTTCCATCTCGGGTCGCTTCGTTCACCTGCGCGTCCACTCCGAAGTCTCGCTGGTCGACTGCCTGGTGCGGCTc > 2:391070‑M2/2‑148 (MQ=255) | CTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTGGTGCGGATC > NC_002947/1799854‑1800085 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |