New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1974528 =	52 (0.800)	4 (0.060)	4/252	NT	8.0%	coding (538/1086 nt)	serC	3‑phosphoserine/phosphohydroxythreonine aminotransferase
	?	NC_002947	1974623 =	43 (0.690)					coding (633/1086 nt)	serC	3‑phosphoserine/phosphohydroxythreonine aminotransferase

AACCTTGTAGTCGAGCATGGTCGGGCAGCTGCTGCGGGCATGGCCCAACAGGTCTTCGCGCACGATCACCACCACCAGGCCGCTTGGGCCGATATTCTTCTGCGCGCCGGCGTAGATCAGGCCGAACTGCGACACATCGATCGGGCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1974677‑1974528 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgaAGACCTGTTGGGCCATGCCCGCAGCAGCTGCCCGACCATGCTCGACTACAAGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGG  >  NC_002947/1974623‑1974725                                                                                                                                                                                                                                                               AACCTTGTAGTCGAGCATGGTCGGGCAGCTGCTGCGGGCATGGCCCAACAGGTCTTCGCGCACGATCACCACCACCAGGCCGCTTGGGCCGATATTCTTCTGCGCGCCGGCGTAGATCAGGCCGAACTGCGACACATCGATCGGGCGC                                                                                                           >  2:135542/1‑148                                                     TCTTCGCGCACGATCACCACCACCAGGCCGCTTGGGCCGATATTCTTCTGCGCGCCGGCGTAGATCAGGCCGAACTGCGACACATCGATCGGGCGCGAAGACCTGTTGGGCCATGCCCGCAGCAGCTGCCCGACCATGCTCGACTAC                                                        >  7:157742/1‑147                                                       TTCGCGCACGATCACCACCACCAGGCCGCTTGGGCCGATATTCTTCTGCGCGCCGGCGTAGATCAGGCCGAACTGCGACACATCGATCGGGCGCGAAGACATGTTGGGCCATGCCCGCAGCAGCTGCCCGACCATGCTCGACTACAAGG                                                    >  8:96758/1‑149                                                             CACGATCACCACCACCAGGCCGCTTGGGCCGATATTCTTCTGCGCGCCGGCGTAGATCAGGCCGAACTGCGACACATCGATCGGGCGCGAAGACCTGTTGGGCCATGCCCGCAGCAGCTGCCCGACCATGCTCGACTACAAGGTTTCGG                                              <  7:96758/149‑1                                                                                                         CGCCGGCGTAGATCAGGCCGAACTGCGACACATCGATCGGGCGCGAAGACCTGTTGGGCCATGCCCGCAGCAGCTGCCCGACCATGCTCGACTACAAGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGG  <  8:157742/149‑1                                                                                                                                                                                                                                                               AACCTTGTAGTCGAGCATGGTCGGGCAGCTGCTGCGGGCATGGCCCAACAGGTCTTCGCGCACGATCACCACCACCAGGCCGCTTGGGCCGATATTCTTCTGCGCGCCGGCGTAGATCAGGCCGAACTGCGACACATCGATCGGGCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1974677‑1974528 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgaAGACCTGTTGGGCCATGCCCGCAGCAGCTGCCCGACCATGCTCGACTACAAGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGG  >  NC_002947/1974623‑1974725

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.