New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 224942779 (1.210)4 (0.070) 4/244 NT 5.3% coding (172/3297 nt) PP_1983 PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
?NC_002947 = 2249469 69 (1.150)coding (130/3297 nt) PP_1983 PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase

ATACGGTGGCGCATGGCTTGCTCCACCGGCTCGCCATTGACCACCGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2249270‑2249427
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgggtgccTGGCTATGGGATATCGAAAGCGGCAGGGTTAGTTGGTCGCGGGGCACCCAGGCCCTGTTCGGTTTCGATCCACAGCGGCCACTGCCCGCCGATATCGATTACCTCGACCTGCTGCCCGAGGAGGATCGCGCCCGCACGCGCCAGGTG  <  NC_002947/2249469‑2249323
                                                                                                                                                                                                                                                                                                                 
ATACGGTGGCGCATGGCTTGCTCCACCGGCTCGCCATTGACCACCGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGC                                                                                                                                                              <  1:388877/149‑1
      TGGCGCAGGGCTTGCTCCACCGGCTCGCCATTGACCACCGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGT                                                                                                                                                        <  3:108633/149‑1
                                         CACCGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCGGGCTATGGGATATCGAAAGCGGCAGGGTTAG                                                                                                                     >  3:37654/1‑149
                                                  GAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACGGGGCCTGG                                                                                                                                                          >  5:336820/1‑103
                                                  GAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACGGGGCCTGG                                                                                                                                                          <  6:336820/103‑1
                                                               GTGCGGGCGCGATCCTCCTCGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCTGGCTATGGGATATCGAAAGCGGCAGGGTTAGTTGGTCGCGGGGCACCCAGGCC                                                                                               <  4:37654/149‑1
                                                                              TCCTCGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCTGGCTATGGGATATCGAAAGCGGCAGGGTTAGTTGGTCGCGGGGCACC                                                                                                     <  7:169946/128‑1
                                                                              TCCTCGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCTGGCTATGGGATATCGAAAGCGGCAGGGTTAGTTGGTCGCGGGGCACC                                                                                                     >  8:169946/1‑128
                                                                                                                                                       GGGTGCCTGGCTATGGGATATCGAAAGCGGCAGGGTTAGTTGGTCGCGGGGCACCCAGGCCCTGTTCGGTTTCGATCCACAGCGGCCACTGCCCGCCGATATCGATTACCTCGACCTGCT                                    >  1:298463/1‑120
                                                                                                                                                       GGGTGCCTGGCTATGGGATATCGAAAGCGGCAGGGTTAGTTGGTCGCGGGGCACCCAGGCCCTGTTCGGTTTCGATCCACAGCGGCCACTGCCCGCCGATATCGATTACCTCGACCTGCT                                    <  2:298463/120‑1
                                                                                                                                                            CCTGGCTATGGGATATCGAAAGCGGCAGGGTTAGTTGGTCGCGGGGCACCCAGGCCCTGTTCGGTTTCGATCCACAGCGGCCACTGCCCGCCGATATCGATTACCTCGACCTGCTGCCCGAGGAGGATCGCGCCCGCACGCGCCAGGTG  <  4:189902/149‑1
                                                                                                                                                            CCTGGCTATGGGATATCGAAAGCGGCAGGGTTAGTTGGTCGCGGGGCACCCAGGCCCTGTTCGGTTTCGATCCACAGCGGCCACTGCCCGCCGATATCGATTACCTCGACCTGCTGCCCGAGGAGGATCGCGCCCGCACGCGCCAGGT   <  4:38730/148‑1
                                                                                                                                                                                                                                                                                                                 
ATACGGTGGCGCATGGCTTGCTCCACCGGCTCGCCATTGACCACCGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2249270‑2249427
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgggtgccTGGCTATGGGATATCGAAAGCGGCAGGGTTAGTTGGTCGCGGGGCACCCAGGCCCTGTTCGGTTTCGATCCACAGCGGCCACTGCCCGCCGATATCGATTACCTCGACCTGCTGCCCGAGGAGGATCGCGCCCGCACGCGCCAGGTG  <  NC_002947/2249469‑2249323

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.