New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2249427	79 (1.210)	4 (0.070)	4/244	NT	5.3%	coding (172/3297 nt)	PP_1983	PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
	?	NC_002947	= 2249469	69 (1.150)					coding (130/3297 nt)	PP_1983	PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase

GGCTTGCTCCACCGGCTCGCCATTGACCACCGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGGCGCAA  >  NC_002947/2249284‑2249574                                                                                                                                                 |                                                                                                                                                    ggCTTGCTCCACCGGCTCGCCATTGACAACCGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCcgc                                                                                                                                                 >  4:5256/1‑148 (MQ=255)       cTCCACCGGCTCGCCATTGACCACCGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAAc                                                                                                                                          <  7:198228/149‑1 (MQ=255)       cTCCACCGGCTCGCCATTGACCACCGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAAc                                                                                                                                          <  1:90556/149‑1 (MQ=255)           aCCGGCTCGCCATTGACCACCGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAAc                                                                                                                                      >  2:182004/1‑149 (MQ=255)           aCCGGCTCGCCATTGACCACCGCCTGCAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAAc                                                                                                                                      >  1:217555/1‑149 (MQ=255)              ggCTCGCCATTGACCACCGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCt                                                                                                                                   <  7:305093/149‑1 (MQ=255)                    ccATTGACCCCCGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAAACGAACAGGGCCTGGGTGCCCCGCGCCCAACTATCCATGCCGCt                                                                                                                             >  8:93462/1‑149 (MQ=255)                      aTTGACCACCGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCT‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCttt                                                                                                                           <  5:225830/149‑1 (MQ=255)                      aTTGACCACCGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCttt                                                                                                                           <  5:231437/149‑1 (MQ=255)                      aTTGACCACCGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAAGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCttt                                                                                                                           <  2:204402/149‑1 (MQ=255)                       ttGACCACCGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCAGCATTc                                                                                                                          >  3:81873/1‑149 (MQ=255)                          accaccGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGat                                                                                                                       <  4:153813/149‑1 (MQ=255)                          accaccGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGa                                                                                                                        >  7:275127/1‑148 (MQ=255)                          accaccGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGa                                                                                                                        >  2:150197/1‑148 (MQ=255)                           ccaccGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGat                                                                                                                       <  5:83856/148‑1 (MQ=255)                            caccGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCgggctatgggatatcgaaagcggcagggttag                                                                                                                     >  3:37654‑M1/1‑117 (MQ=255)                            caccGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGAGA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGatat                                                                                                                     >  1:287498/1‑149 (MQ=255)                              ccgccgGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGat                                                                                                                       >  7:369830/1‑145 (MQ=255)                              ccGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGat                                                                                                                       <  8:369830/145‑1 (MQ=255)                               cGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATcc                                                                                                                   >  4:206586/1‑148 (MQ=255)                               cGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATcc                                                                                                                   >  8:371129/1‑148 (MQ=255)                                 ccTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCAGGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATc                                                                                                                    >  1:77358/1‑146 (MQ=255)                                 ccTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATc                                                                                                                    <  2:77358/145‑1 (MQ=255)                                 ccTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCa                                                                                                                 >  4:217903/1‑148 (MQ=255)                                  cTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCa                                                                                                                 >  6:194469/1‑147 (MQ=255)                                  cTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATa                                                                                                               <  8:275127/149‑1 (MQ=255)                                        cacCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAgg                                                                                                         <  4:189902‑M2/149‑3 (MQ=255)                                         acCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAgg                                                                                                         <  4:38730‑M2/148‑3 (MQ=255)                                           cTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGAGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAg                                                                                                              >  8:229633/1‑141 (MQ=255)                                           cTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGAGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAg                                                                                                              <  7:229633/141‑1 (MQ=255)                                            ttgcggGTGAGGGCGCGTTCCTCCTCGGGCA‑GCAGGTCGAGGGAATCGATATGGGCGGGCAGTGGCCGCTGGGGATCGAAACGGAACTGGGCCTGGGTGCCCCGCTACCAACTATGCCTGCGGCTTTCGATATc                                                                                                                    <  4:334812/132‑1 (MQ=255)                                            tGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACCGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATc                                                                                                                    >  3:334812/1‑134 (MQ=255)                                                 cgTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGt                                                                                                <  6:83711/149‑1 (MQ=255)                                                 cgTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGt                                                                                                <  4:352281/149‑1 (MQ=255)                                                 cgTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGt                                                                                                <  5:194469/149‑1 (MQ=255)                                                  gTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCtggctatgggatatcgaaagcggcagggttagttggtcgcggggcacccaggcc                                                                                               <  4:37654‑M1/149‑55 (MQ=255)                                                   tGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTgc                                                                                              <  1:182004/149‑1 (MQ=255)                                                   tGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTgc                                                                                              <  3:189902/149‑1 (MQ=255)                                                      gggCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCa                                                                                           <  7:159632/149‑1 (MQ=255)                                                        gcgcGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCAcc                                                                                         >  3:57997/1‑149 (MQ=255)                                                            gATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCACGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGtt                                                                                      >  2:344784/1‑148 (MQ=255)                                                             aTCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGa                                                                                    <  1:150197/149‑1 (MQ=255)                                                                ctcctcGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCATGCCGATTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAgcg                                                                                 >  3:53799/1‑149 (MQ=255)                                                                 tcctcGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCtggctatgggatatcgaaagcggcagggttagttggtcgcggggcacc                                                                                                     >  8:169946‑M1/1‑80 (MQ=255)                                                                 tcctcGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCtggctatgggatatcgaaagcggcagggttagttggtcgcggggcacc                                                                                                     <  7:169946‑M1/128‑49 (MQ=255)                                                                   ctcGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTg                                                                              >  5:256144/1‑149 (MQ=255)                                                                   ctcGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTg                                                                              >  1:198269/1‑149 (MQ=255)                                                                        gca‑gcaGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCTCCCAGGTGCGCACCGTTGAGCGCTGCcagc                                                                         <  1:36602/149‑1 (MQ=255)                                                                        gca‑gcaGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCcag                                                                          >  7:217103/1‑148 (MQ=255)                                                                          a‑gcagGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAggcaccc                                                                                                    <  2:298463‑M2/120‑8 (MQ=255)                                                                          a‑gcagGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAggcaccc                                                                                                    >  1:298463‑M2/1‑113 (MQ=255)                                                                            gcagGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGt                                                                      >  4:133371/1‑149 (MQ=255)                                                                             cagGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGtt                                                                     >  2:128732/1‑149 (MQ=255)                                                                                 tCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGc                                                                             >  8:193763/1‑137 (MQ=255)                                                                                 tCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGc                                                                             <  7:193763/137‑1 (MQ=255)                                                                                  cGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCggg                                                                <  3:217903/149‑1 (MQ=255)                                                                                   gAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCgggg                                                               >  1:192393/1‑149 (MQ=255)                                                                                   gAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCggg                                                                <  2:198269/148‑1 (MQ=255)                                                                                   gAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCggg                                                                <  8:145502/148‑1 (MQ=255)                                                                                     ggTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCg                                                             <  7:371129/149‑1 (MQ=255)                                                                                       tAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCca                                                                           <  8:1834/133‑1 (MQ=255)                                                                                       tAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCca                                                                           >  7:1834/1‑133 (MQ=255)                                                                                        aaTCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTc                                                          >  3:270071/1‑149 (MQ=255)                                                                                         aTCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCt                                                         >  2:251211/1‑149 (MQ=255)                                                                                           cGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGc                                                       >  1:24562/1‑149 (MQ=255)                                                                                             atatCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGc                                                       >  3:54823/1‑147 (MQ=255)                                                                                              tatCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAg                                                    <  2:24562/149‑1 (MQ=255)                                                                                              tatCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGAGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAg                                                    <  7:93462/149‑1 (MQ=255)                                                                                               atCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAg                                                    <  3:5256/148‑1 (MQ=255)                                                                                                     gggCAGTGTCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGc                                                       >  7:265725/1‑139 (MQ=255)                                                                                                     gggCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGc                                                       <  8:265725/139‑1 (MQ=255)                                                                                                     gggCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCt                                             <  3:206586/149‑1 (MQ=255)                                                                                                           tGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGGCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGCCt                                       >  3:192262/1‑149 (MQ=255)                                                                                                           tGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACt                                       >  7:97834/1‑149 (MQ=255)                                                                                                               cGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTc                                                          >  4:149328/1‑126 (MQ=255)                                                                                                               cGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTc                                                          <  3:149328/126‑1 (MQ=255)                                                                                                                      gATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGAt                              >  8:40113/1‑147 (MQ=255)                                                                                                                      gATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCACGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATc                             <  1:128732/148‑1 (MQ=255)                                                                                                                       aTCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAg                           <  8:97834/149‑1 (MQ=255)                                                                                                                           aaaCCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGc                       <  4:54823/149‑1 (MQ=255)                                                                                                                            aaCCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCg                      >  3:6141/1‑149 (MQ=255)                                                                                                                             aCCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTCCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCgg                     <  4:128008/149‑1 (MQ=255)                                                                                                                               cGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGt                   >  1:396327/1‑149 (MQ=255)                                                                                                                                    aGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCt                                                         >  6:325238/1‑106 (MQ=255)                                                                                                                                    aGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCt                                                         <  5:325238/106‑1 (MQ=255)                                                                                                                                    aGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTcg              <  2:217555/149‑1 (MQ=255)                                                                                                                                      ggCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAggcacccaggccctgttcggtttcgatccacagcggccactgcccgccgatatcgattacctcgacctgctgcccgaggaggatcgcgcccgcac            <  4:37654‑M2/149‑96 (MQ=255)                                                                                                                                      ggCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTcgcg            >  8:323849/1‑149 (MQ=255)                                                                                                                                           gggTGCCtggctatgggatatcgaaagcggcagggttagttggtcgcggggcacccaggccctgttcggtttcgatccacagcggccactgcccgccgatatcgattacctcgacctgct                                    >  1:298463‑M1/1‑7 (MQ=255)                                                                                                                                           gggTGCCtggctatgggatatcgaaagcggcagggttagttggtcgcggggcacccaggccctgttcggtttcgatccacagcggccactgcccgccgatatcgattacctcgacctgct                                    <  2:298463‑M1/120‑114 (MQ=255)                                                                                                                                            ggTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAggcacccaggccctgttcggtttcgatccacagcggccactgcccgccgatatcgattacctcgacctgctgcccgagga                           >  8:169946‑M2/1‑48 (MQ=255)                                                                                                                                            ggTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAggcacccaggccctgttcggtttcgatccacagcggccactgcccgccgatatcgattacctcgacctgctgcccgagga                           <  7:169946‑M2/128‑81 (MQ=255)                                                                                                                                            ggTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAgg       <  3:38730/148‑1 (MQ=255)                                                                                                                                              tGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGgcgc    <  8:217103/149‑1 (MQ=255)                                                                                                                                                cctggctatgggatatcgaaagcggcagggttagttggtcgcggggcacccaggccctgttcggtttcgatccacagcggccactgcccgccgatatcgattacctcgacctgctgcccgaggaggatcgcgcccgcacgcgccaggtg  <  4:189902‑M1/149‑148 (MQ=255)                                                                                                                                                cctggctatgggatatcgaaagcggcagggttagttggtcgcggggcacccaggccctgttcggtttcgatccacagcggccactgcccgccgatatcgattacctcgacctgctgcccgaggaggatcgcgcccgcacgcgccaggt   <  4:38730‑M1/148‑147 (MQ=255)                                                                                                                                                 |                                                                                                                                                    GGCTTGCTCCACCGGCTCGCCATTGACCACCGCCTGGAACACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCA‑GCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGGCGCAA  >  NC_002947/2249284‑2249574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.