New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 224942779 (1.210)4 (0.070) 4/244 NT 5.3% coding (172/3297 nt) PP_1983 PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
?NC_002947 = 2249469 69 (1.150)coding (130/3297 nt) PP_1983 PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase

CACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGGCGCAAAAAGCGGTTTGCTGATTTGGGCATTGGTACCAG  >  NC_002947/2249323‑2249607
                                                                                                                                                  |                                                                                                                                          
cacCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAgg                                                                                                                                          <  4:189902‑M2/149‑3 (MQ=255)
 acCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAgg                                                                                                                                          <  4:38730‑M2/148‑3 (MQ=255)
         cgTGCGGGCGCGATCCTCCTCGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGt                                                                                                                                 <  5:194469/149‑1 (MQ=255)
         cgTGCGGGCGCGATCCTCCTCGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGt                                                                                                                                 <  6:83711/149‑1 (MQ=255)
         cgTGCGGGCGCGATCCTCCTCGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGt                                                                                                                                 <  4:352281/149‑1 (MQ=255)
           tGCGGGCGCGATCCTCCTCGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTgc                                                                                                                               <  1:182004/149‑1 (MQ=255)
           tGCGGGCGCGATCCTCCTCGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTgc                                                                                                                               <  3:189902/149‑1 (MQ=255)
              gggCGCGATCCTCCTCGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCa                                                                                                                            <  7:159632/149‑1 (MQ=255)
                gcgcGATCCTCCTCGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCAcc                                                                                                                          >  3:57997/1‑149 (MQ=255)
                    gATCCTCCTCGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCACGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGtt                                                                                                                       >  2:344784/1‑148 (MQ=255)
                     aTCCTCCTCGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGa                                                                                                                     <  1:150197/149‑1 (MQ=255)
                        ctcctcGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCATGCCGATTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAgcg                                                                                                                  >  3:53799/1‑149 (MQ=255)
                           ctcGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTg                                                                                                               >  5:256144/1‑149 (MQ=255)
                           ctcGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTg                                                                                                               >  1:198269/1‑149 (MQ=255)
                                gcagcaGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCTCCCAGGTGCGCACCGTTGAGCGCTGCcagc                                                                                                          <  1:36602/149‑1 (MQ=255)
                                gcagcaGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCcag                                                                                                           >  7:217103/1‑148 (MQ=255)
                                  agcagGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAggcaccc                                                                                                                                     <  2:298463‑M2/120‑8 (MQ=255)
                                  agcagGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAggcaccc                                                                                                                                     >  1:298463‑M2/1‑113 (MQ=255)
                                   gcagGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGt                                                                                                       >  4:133371/1‑149 (MQ=255)
                                    cagGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGtt                                                                                                      >  2:128732/1‑149 (MQ=255)
                                        tCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGc                                                                                                              >  8:193763/1‑137 (MQ=255)
                                        tCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGc                                                                                                              <  7:193763/137‑1 (MQ=255)
                                         cGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCggg                                                                                                 <  3:217903/149‑1 (MQ=255)
                                          gAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCgggg                                                                                                >  1:192393/1‑149 (MQ=255)
                                          gAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCggg                                                                                                 <  2:198269/148‑1 (MQ=255)
                                          gAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCggg                                                                                                 <  8:145502/148‑1 (MQ=255)
                                            ggTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCg                                                                                              <  7:371129/149‑1 (MQ=255)
                                              tAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCca                                                                                                            >  7:1834/1‑133 (MQ=255)
                                              tAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCca                                                                                                            <  8:1834/133‑1 (MQ=255)
                                               aaTCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTc                                                                                           >  3:270071/1‑149 (MQ=255)
                                                aTCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCt                                                                                          >  2:251211/1‑149 (MQ=255)
                                                  cGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGc                                                                                        >  1:24562/1‑149 (MQ=255)
                                                    atatCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGc                                                                                        >  3:54823/1‑147 (MQ=255)
                                                     tatCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAg                                                                                     <  2:24562/149‑1 (MQ=255)
                                                     tatCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGAGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAg                                                                                     <  7:93462/149‑1 (MQ=255)
                                                      atCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAg                                                                                     <  3:5256/148‑1 (MQ=255)
                                                            gggCAGTGTCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGc                                                                                        >  7:265725/1‑139 (MQ=255)
                                                            gggCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGc                                                                                        <  8:265725/139‑1 (MQ=255)
                                                            gggCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCt                                                                              <  3:206586/149‑1 (MQ=255)
                                                                  tGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGGCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGCCt                                                                        >  3:192262/1‑149 (MQ=255)
                                                                  tGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACt                                                                        >  7:97834/1‑149 (MQ=255)
                                                                      cGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTc                                                                                           >  4:149328/1‑126 (MQ=255)
                                                                      cGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTc                                                                                           <  3:149328/126‑1 (MQ=255)
                                                                             gATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGAt                                                               >  8:40113/1‑147 (MQ=255)
                                                                             gATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCACGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATc                                                              <  1:128732/148‑1 (MQ=255)
                                                                              aTCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAg                                                            <  8:97834/149‑1 (MQ=255)
                                                                                  aaaCCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGc                                                        <  4:54823/149‑1 (MQ=255)
                                                                                   aaCCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCg                                                       >  3:6141/1‑149 (MQ=255)
                                                                                    aCCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTCCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCgg                                                      <  4:128008/149‑1 (MQ=255)
                                                                                      cGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGt                                                    >  1:396327/1‑149 (MQ=255)
                                                                                           aGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCt                                                                                          >  6:325238/1‑106 (MQ=255)
                                                                                           aGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCt                                                                                          <  5:325238/106‑1 (MQ=255)
                                                                                           aGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTcg                                               <  2:217555/149‑1 (MQ=255)
                                                                                             ggCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAggcacccaggccctgttcggtttcgatccacagcggccactgcccgccgatatcgattacctcgacctgctgcccgaggaggatcgcgcccgcac                                             <  4:37654‑M2/149‑96 (MQ=255)
                                                                                             ggCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTcgcg                                             >  8:323849/1‑149 (MQ=255)
                                                                                                   ggTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAggcacccaggccctgttcggtttcgatccacagcggccactgcccgccgatatcgattacctcgacctgctgcccgagga                                                            <  7:169946‑M2/128‑81 (MQ=255)
                                                                                                   ggTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAggcacccaggccctgttcggtttcgatccacagcggccactgcccgccgatatcgattacctcgacctgctgcccgagga                                                            >  8:169946‑M2/1‑48 (MQ=255)
                                                                                                   ggTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAgg                                        <  3:38730/148‑1 (MQ=255)
                                                                                                     tGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGgcgc                                     <  8:217103/149‑1 (MQ=255)
                                                                                                         ccGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGGCGCaaa                                  >  7:270529/1‑148 (MQ=255)
                                                                                                           gcgACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGGTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGGCGCAAAAAg                               <  8:149346/149‑1 (MQ=255)
                                                                                                                 aaCTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGGCGCAAAAAGCGGttt                         >  4:262571/1‑149 (MQ=255)
                                                                                                                  aCTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGGCGCAAAAAGCGGTTTg                        <  1:251211/149‑1 (MQ=255)
                                                                                                                   cTAACCCTGCCGCTTTCGATATCCCATAGCCCggcacccaggccctgttcggtttcgatccacagcggccactgcccgccgatatcgattacctcgacctgctgcccgaggaggatcgcgcccgcacgcgccaggtgttccaggcggtg                       >  3:37654‑M2/1‑32 (MQ=255)
                                                                                                                       cccTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGGCGCAAAAAGCGGTTTGCTGAt                   >  7:386342/1‑149 (MQ=255)
                                                                                                                       cccTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCACTGCCAGCAGTTGCGGGGCGTTATGCCAGGCCTGATCGGAATCATGGGGATAAGATGAGGGTATTCGCGGCAGGCGCAAAAAGAGGTTTgatgat                   >  7:60075/1‑149 (MQ=255)
                                                                                                                        ccTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGgcgc                                     <  8:357305/130‑1 (MQ=255)
                                                                                                                        ccTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGgcgc                                     >  7:357305/1‑130 (MQ=255)
                                                                                                                        ccTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGGCGCAAAAAg                               >  6:54047/1‑136 (MQ=255)
                                                                                                                        ccTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGGCGCAAAAAg                               <  5:54047/136‑1 (MQ=255)
                                                                                                                        ccTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGGCGCAAAAAGCGGTTTGCTGAtt                  <  1:344784/149‑1 (MQ=255)
                                                                                                                         cTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGGCGCAAAAAGCGGTTTGCTGAttt                 <  2:287498/149‑1 (MQ=255)
                                                                                                                         cTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGGCGCAAAAAGCGGTTTGCTGAttt                 >  6:13870/1‑149 (MQ=255)
                                                                                                                              gCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGGCGCAAAAAGCGGTTTGCTGATTTGGGCa            >  8:60535/1‑149 (MQ=255)
                                                                                                                                tttCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGGCGCAAAAAGCGGTTTGCTGATTTGGGCAtt          >  3:9910/1‑149 (MQ=255)
                                                                                                                                  tCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGGCGCAAAAAGCGGTTTGCTGATTTGGGCAtt          <  5:13870/147‑1 (MQ=255)
                                                                                                                                   cGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGGCGCAAAAAGCGGTTTGCTg                     >  6:31879/1‑135 (MQ=255)
                                                                                                                                   cGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGGCGCAAAAAGCGGTTTGCTg                     <  5:31879/135‑1 (MQ=255)
                                                                                                                                    gATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGGCGCAAAAAGCGGTTTGCTGATTTGGGCATTGGt       <  4:53799/148‑1 (MQ=255)
                                                                                                                                      tatCCCATATCCTTGCACCCAGGTGCGCACCGTTTTGCGCTTCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGTGGCAGGCGCAAAAAGCGGTTTGCTGATTTGGGCATTGGt       <  8:60075/146‑1 (MQ=255)
                                                                                                                                        tCCCATAGCCAGGCACCGAGGTGCGGACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTGTGCCAGGCCTGGTCGGACTCCTGGTGATCAGCTGCGGGTATTCGCGGCAGGCGCAAAAAGCGGTTTGCTGATTTGGGCATTGGTACCAg  <  4:57997/149‑1 (MQ=255)
                                                                                                                                        tCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGGCGCAAAAAGCGGTTTGCTGATTTGGGCATTGGTACCa   <  7:40113/148‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                          
CACCTGGCGCGTGCGGGCGCGATCCTCCTCGGGCAGCAGGTCGAGGTAATCGATATCGGCGGGCAGTGGCCGCTGTGGATCGAAACCGAACAGGGCCTGGGTGCCCCGCGACCAACTAACCCTGCCGCTTTCGATATCCCATAGCCAGGCACCCAGGTGCGCACCGTTGAGCGCTGCCAGCAGTTGCGGGGCGTTCTGCCAGGCCTGCTCGGACTCCTGGGGATCAGCTGCGGGTATTCGCGGCAGGCGCAAAAAGCGGTTTGCTGATTTGGGCATTGGTACCAG  >  NC_002947/2249323‑2249607

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.