| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_002947 | 2,837,076 | (CATGGTGG)13→1 | 24.5% | intergenic (‑28/+60) | sad‑I ← / ← PP_2489 | NAD+‑dependent succinate semialdehyde dehydrogenase/xenobiotic reductase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2837075 | 14 (0.220) | 4 (0.070) | 4/240 | NT | 24.5% | intergenic (‑27/+156) | sad‑I/PP_2489 | NAD+‑dependent succinate semialdehyde dehydrogenase/xenobiotic reductase |
| ? | NC_002947 | 2837172 = | 12 (0.200) | intergenic (‑124/+59) | sad‑I/PP_2489 | NAD+‑dependent succinate semialdehyde dehydrogenase/xenobiotic reductase | |||||
AAGCTGCGTTCTTTCCAGTCGAGGAACGCGCTATGTGCGTCGTCCAGCGCCTGATTGACCTGGTCGTCGGT‑GGTTTCTGGGAAGGTCTTGAGCAATTCCCCGTTATAGGGGTTGATAGTGGCGTAAGCCATGTGATTCTCCTACTCGTGGCATGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2836918‑2837075‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggcatggtggAATGGTGGCATGAAAAGCTCCGGTCTTTCCGTACGTGGTGACAGGGGCTGAAACTCGGATTACTCCACCGGCGTATACCGTTCGAGCCAGTGGGCGTAAGGGGGGGGCAGTACCCATGCGGGGCGCTCGACGCCAAGGGTGCGAGCT > NC_002947/2837172‑2837318 AAGCTGCGTTCTTTCCAGTCGAGGAACGCGCTATGTGCGTCGTCCAGCGCCTGATTGACCTGGTCGTCGGT‑GGTTTCTGGGAAGGTCTTGAGCAATTCCCCGTTATAGGGGTTGATAGTGGCGTAAGCCATGTGATTCTCCTACTCGT < 8:344480/148‑1 GCGTTCTTTCCAGTCGAGGAACGCGCTATGTGCGTCGTCCAGCGCCTGATTGACCTGGTCGTCGGT‑GGTTTCTGGGAAGGTCTTGAGCAATTCCCCGTTATAGGGGTTGATAGTGGCGTAAGCCATGTGATTCTCCTACTCGTGGCATG > 4:390817/1‑149 CGTTCTTTCCAGTCGAGGAACGCGCTATGTGCGTCGTCCAGCGCCTGATTGACCTGGTCGTCGGT‑GGTTTCTGGGAAGGTCTTGAGCAATTCCCCGTTATAGGGGTTGATAGTGGCGTAAGCCATGTGATTCTCCTACTCGTGGCATGG < 6:171049/149‑1 GTTCTTTCCAGTCGAGGAACGCGCTATGTGCGTCGTCCAGCGCCTGATTGACCTGGTCGTCGGT‑GGTTTCTGGGAAGGTCTTGAGCAATTCCCCGTTATAGGGGTTGATAGTGGCGTAAGCCATGTGATTCTCCTACTCGTGGCATGGT < 3:125181/149‑1 GTTCTTTCCAGTCGAGGAACGCGCTATGTGCGTCGTCCAGCGCCTGATTGACCTGGTCGTCGGT‑GGTTTCTGGGAAGGTCTTGAGCAATTCCCCGTTATAGGGGTTGATAGTGGCGTAAGCCATGTGATTCTCCTACTCGTGGCATGGT < 6:40400/149‑1 TTCTTTCCAGTCGAGGAACGCGCTATGTGCGTCGTCCAGCGCCTGATTGACCTGGTCGTCGGT‑GGTTTCTGGGAAGGTCTTGAGCAATTCCCCGTTATAGGGGTTGATAGTGGCGTAAGCCATGTGATTCTCCTACTCGTGGCATGGTG < 3:390817/149‑1 GAGGAACGCGCTATGTGCGTCGTCCAGCGCCTGATTGACCTGGTCGTCGGTAGGTTTCTGGGAAGGTCTTGAGCAATTCCCCGTTATAGGGGTTGATAGTGGCGTAAGCCATGTGATTCTCCTACTCGTGGCATGGTGGAATGGTGGCA > 1:304818/1‑149 GGAAGGTCTTGAGCAATTCCCCGTTATAGGGGTTGATAGTGGCGTAAGCCATGTGATTCTCCTACTCGTGGCATGGTGGAATGGTGGCATGAAAAGCTGCGGTATTTCCGTACGTGGTGACAGGGGCTGAAACTCGGATTACTACACag > 1:279056/1‑147 GAAGGTCTTGAGCAATTCCCCGTTATAGGGGTTGATAGTGGCGTAAGCCATGTGATTCTCCTACTCGTGGCATGGTGGAATGGTGGCATGAAAACATCCGGTCTTTCCGTACGTGGTGACAGGGGATGA > 6:172584/1‑129 CCGTTTTAGTGTTTGATAGCTTCGTAAGCCATGTGATTCTCCTACTCGTGGCATGGTGGAATGGTGGCATGAAAAGCTCCGGTCTTTCCGTACGTGGTGACAGGGGCTGAAACTCGGATTACTCCACCGGCGTATACCGTTCGAGCCAG < 2:279056/149‑1 GCATGGTGGAATGGTGGCATGAAAAGCTCCGGTCTTTCCGTACGTGGTGACAGGGGCTGAAACTCGGATTACTCCACCGGCGTATACCGTTCGAGCCAGTGGGCGTAAGGGGGGGGCAGTACCCATGCGGGGCGCTCGACGCCAAGGGT > 2:108126/1‑149 GCATGGTGGAATGGTGGCATGAAAAGCTCCGGGCTTTCCGTACGTGGGGACAGGGGCTGAAACTCGGATTACTCCACCGGCGTATACCGTTCGAGCCAGTGGGCGTAAGGGGGGGGCAGTACCCATGCGGGGCGCTCGACGCCAAGGGT < 3:50990/149‑1 GTGGAATGGTGGCATGAAAAGCTCCGGTCTTTCCGTACGTGGTGACAGGGGCTGAAACTCGGATTACTCCACCGGCGTATACCGTTCGAGCCAGTGGGCGTAAGGGGGGGGCAGTACCCATGCGGGGCGCTCGACGCCAAGGGTGCGAG > 8:269711/1‑149 GGAATGGTGGCATGAAAAGCTCCGGTCTTTCCGTACGTGGTGACAGGGGCTGAAACTCGGATTACTCCACCGGCGTATACCGTTCGAGACAGTGGGCGTAAGGGGGGGGAAGTACCCATGCGGGGCGCTCGACGCCAAGGGTGCGAGCT > 5:7658/1‑149 AAGCTGCGTTCTTTCCAGTCGAGGAACGCGCTATGTGCGTCGTCCAGCGCCTGATTGACCTGGTCGTCGGT‑GGTTTCTGGGAAGGTCTTGAGCAATTCCCCGTTATAGGGGTTGATAGTGGCGTAAGCCATGTGATTCTCCTACTCGTGGCATGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2836918‑2837075‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggcatggtggAATGGTGGCATGAAAAGCTCCGGTCTTTCCGTACGTGGTGACAGGGGCTGAAACTCGGATTACTCCACCGGCGTATACCGTTCGAGCCAGTGGGCGTAAGGGGGGGGCAGTACCCATGCGGGGCGCTCGACGCCAAGGGTGCGAGCT > NC_002947/2837172‑2837318 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |