| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2881022 = | 46 (0.710) | 4 (0.070) | 4/248 | NT | 8.7% | coding (864/1176 nt) | PP_2535 | transport protein |
| ? | NC_002947 | 2881070 = | 41 (0.670) | coding (912/1176 nt) | PP_2535 | transport protein | |||||
CATTGCCCAGGTTGAACGCGCCAATGTTCACCGCAGAGGCCAGGTTGGGGGCATCCTTGGCCGCTTCCATGACCCGCATTTGCAGCGGCGGCACCAGGGCAAAGCTGGCCGCACCCCAGACCAGGATCGCCAAGGCGGTCGGCAGCGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2881173‑2881022‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccagCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTGGGCGGCGCAGTGATCAATGCGGGG > NC_002947/2881070‑2881214 CATTGCCCAGGTTGAACGCGCCAATGTTAACCGCAGAGGCCAGGTTGGGGGCATCCTTGGCCGCTTCCATGACCCGCATTTGCAGCGGCGGCACCAGGGCAAAGCTGGCCGCACCCCAGACCAGGATCGCCAAGGCGGTCGGCAGCGGC > 2:313613/1‑149 TTGCCCAGGTTGAACGCGCCAATGTTCACCGCAGAGGCCAGGTTGGGGGCATCCTTGGCCGCTTCCATGACCCGCATTTGCAGCGGCGGCACCAGGGCAAAGCTGGCCGCACCCCAGACCAGGATCGCCAAGGCGGTCGGCAGCGGCCA < 7:387012/149‑1 AAAGCTGGCCGCACCCCAGACCAGGATCGCCAAGGCGGTCGGCAGCGGCCAGCTTTGCCCTAGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTG > 4:399053/1‑149 TGGCCGCACCCCAGACCAGGATCGCCAAGGCGGTCGGCAGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAA > 7:145808/1‑149 CCCCAGACCAGGATCGCCAAGGCGGTCGGCAGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCG < 8:145808/149‑1 AAGGCGGTCGGCAGCGGCCAGCTTTGCCCTAGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTGGGCGGCG < 3:399053/149‑1 GCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGAGAACATTGGCGCGTTAAACCTGGGCAATGCGATCGGTGCGGCGCTGGGCGGCGCAGTGATGAATGCGGG > 7:28403/1‑149 GCCAGCTTTGCCCTGGTGCCGCCACTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTGGGTGGCGCAGTGATCAATGCGGG > 4:23377/1‑149 CCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTGGGCGGCGCAGTGATCAATGCGGGG > 8:203941/1‑149 CATTGCCCAGGTTGAACGCGCCAATGTTCACCGCAGAGGCCAGGTTGGGGGCATCCTTGGCCGCTTCCATGACCCGCATTTGCAGCGGCGGCACCAGGGCAAAGCTGGCCGCACCCCAGACCAGGATCGCCAAGGCGGTCGGCAGCGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2881173‑2881022‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccagCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTGGGCGGCGCAGTGATCAATGCGGGG > NC_002947/2881070‑2881214 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |