New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2881022 =	46 (0.710)	4 (0.070)	4/248	NT	8.7%	coding (864/1176 nt)	PP_2535	transport protein
	?	NC_002947	2881070 =	41 (0.670)					coding (912/1176 nt)	PP_2535	transport protein

GGGGTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTGGGCGGCGCAGTGATCAATGCGGGG  >  NC_002947/2880925‑2881214                                                                                                                                                  |                                                                                                                                                 ggggTGGCAAGGCGGCGGACCGCTCGATCGATCACACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCttt                                                                                                                                               >  8:89408/1‑149 (MQ=255) caggttgaacgcgccaatgttcaccgcagaggccaggttgggggcatccttggccgcttccatgacccgcatttgcagcggcggcactagggcaaagCTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCttt                                                                                                                                               >  4:399053‑M1/98‑149 (MQ=255)  gggTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCttt                                                                                                                                               <  7:45327/148‑1 (MQ=255)          aGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTg                                                                                                                                      >  7:43311/1‑149 (MQ=255)            gcggcgGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTgcc                                                                                                                                    >  2:175515/1‑149 (MQ=255)            gcggcgGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTgcc                                                                                                                                    >  2:169457/1‑149 (MQ=255)                   aCCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCGGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTg                                                                                                                             <  8:27270/149‑1 (MQ=255)                    ccGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGc                                                                                                                            <  8:120474/149‑1 (MQ=255)                          gatcgatgGCACTCTGATCCTGTCACTGACTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGc                                                                                                                      <  5:298069/149‑1 (MQ=255)                            tcgatcaCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCgg                                                                                                                    <  7:89408/149‑1 (MQ=255)                                    aCTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATgg                                                                                                             >  3:402075/1‑148 (MQ=255)                                                  aCTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGccgccg                                                                                                                                <  2:233801/115‑1 (MQ=255)                                                  aCTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGccgccg                                                                                                                                >  1:233801/1‑115 (MQ=255)                                                      gctgggctgATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGc                                                                                                      <  4:80802/137‑1 (MQ=255)                                                      gctgggctgATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGc                                                                                                      >  3:80802/1‑137 (MQ=255)                                                                      tgctgcTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCg                                                                          <  4:402075/149‑1 (MQ=255)                                                                      tgctgcTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCg                                                                          >  6:243363/1‑149 (MQ=255)                                                                        ctgctgGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGt                                                                        <  7:100634/149‑1 (MQ=255)                                                                         tgctgGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTg                                                                       <  1:175515/149‑1 (MQ=255)                                                                          gctgGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGa                                                                      <  8:43311/149‑1 (MQ=255)                                                                           ctgGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTg                                                                       <  4:315968/147‑1 (MQ=255)                                                                           ctgGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTg                                                                       <  1:169457/147‑1 (MQ=255)                                                                            tgGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGcc                                                                                                                                            <  6:51744/77‑1 (MQ=255)                                                                            tgGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGcc                                                                                                                                            >  5:51744/1‑77 (MQ=255)                                                                              gtgtTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACAt                                                                  >  4:184890/1‑149 (MQ=255)                                                                              gtgtTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGGGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAAc                                                                    <  3:254868/147‑1 (MQ=255)                                                                                 tttCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGACCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTgg                                                               >  2:379149/1‑149 (MQ=255)                                                                                   tCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGGGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGGCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGgc                                                              <  4:188988/148‑1 (MQ=255)                                                                                      gCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGt                                                          >  7:26227/1‑149 (MQ=255)                                                                                       cTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGACCCTTGGCGCGtt                                                         >  4:83861/1‑149 (MQ=255)                                                                                              aaagctggccgcaccccagaccaggatcgccaaggcggtcggcagcggccagCTTTGCCCTAGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTg                                                  >  4:399053‑M2/53‑149 (MQ=255)                                                                                               ggactggCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTgg                                                 >  3:25112/1‑149 (MQ=255)                                                                                                gactggCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGt                                                                                                                                       <  7:90552/62‑1 (MQ=255)                                                                                                gactggCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGt                                                                                                                                       >  8:90552/1‑62 (MQ=255)                                                                                                   tggccgcaccccagaccaggatcgccaaggcggtcggcagcggccagCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCaa                                             >  7:145808‑M2/48‑149 (MQ=255)                                                                                                   TGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCaa                                             <  7:387012‑M1/149‑1 (MQ=255)                                                                                                     GCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTTAACATTGGCGCGTTCAACCTGGGCAATg                                           >  2:313613‑M1/1‑149 (MQ=255)                                                                                                           ccccagaccaggatcgccaaggcggtcggcagcggccagCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCg                                     <  8:145808‑M2/110‑1 (MQ=255)                                                                                                              gACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATcactg                                  >  6:386787/1‑145 (MQ=255)                                                                                                              gACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTg                                  >  6:22659/1‑149 (MQ=255)                                                                                                                 cGCCTTGGCGATCCTGGTCTGGGGTGCGACCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTgcgg                               <  1:379149/149‑1 (MQ=255)                                                                                                                     ttGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCt                           >  5:228012/1‑149 (MQ=255)                                                                                                                       ggCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTgg                         >  4:336995/1‑149 (MQ=255)                                                                                                                          gATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTGggcg                      >  6:133748/1‑149 (MQ=255)                                                                                                                             ccTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTGGgcggcg                   >  7:137082/1‑149 (MQ=255)                                                                                                                             ccTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTGGgcggcg                   >  6:9568/1‑149 (MQ=255)                                                                                                                             aaggcggtcggcagcggccagCTTTGCCCTAGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTGGgcggcg                   <  3:399053‑M2/128‑1 (MQ=255)                                                                                                                               tGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTGGgcggcg                   >  4:93578/1‑147 (MQ=255)                                                                                                                                ggTCGGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTGGGCGGCGCAg                <  1:152520/149‑1 (MQ=255)                                                                                                                                 gTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTGGGCGGCGCAGt               <  4:25112/149‑1 (MQ=255)                                                                                                                                        gTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTgg                         <  2:169433/132‑1 (MQ=255)                                                                                                                                        gTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTgg                         >  1:169433/1‑132 (MQ=255)                                                                                                                                             gccagCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGAGAACATTGGCGCGTTAAACCTGGGCAATGCGATCGGTGCGGCGCTGGGCGGCGCAGTGATGAATGCggg   >  7:28403‑M2/6‑149 (MQ=255)                                                                                                                                             gccagCTTTGCCCTGGTGCCGCCACTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTGGGTGGCGCAGTGATCAATGCggg   >  4:23377‑M2/6‑149 (MQ=255)                                                                                                                                              ccagCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTGGGCGGCGCAGTGATCAATGCgggg  >  8:203941‑M2/5‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                 GGGGTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGGGCAATGCGATCGGTGCGGCGCTGGGCGGCGCAGTGATCAATGCGGGG  >  NC_002947/2880925‑2881214

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.