New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2881022 =	46 (0.710)	4 (0.070)	4/248	NT	8.7%	coding (864/1176 nt)	PP_2535	transport protein
	?	NC_002947	2881070 =	41 (0.670)					coding (912/1176 nt)	PP_2535	transport protein

CGGCCATGCTGGTGCTGTTCGGTGTCGGCCTGACCTTGGGCAACGTGTGGGGTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGG  >  NC_002947/2880877‑2881167                                                                                                                                                  |                                                                                                                                                  ccccgcattgatcactgcgccgcccagcgccgcaccgatcgcattgcccaggttgaacgcgccaatgttcaccgcagaggccaggttgggggcatccttggccgcttccatgacccgcatttgcagcggcggcaccagggcaaagCTgg                                                                                                                                                >  8:203941‑M1/146‑149 (MQ=255)  cccgcattgatcactgcgccacccagcgccgcaccgatcgcattgcccaggttgaacgcgccaatgttcaccgcagaggccaggttgggggcatccttggccgcttccatgacccgcatttgcagtggcggcaccagggcaaagCTGGc                                                                                                                                               >  4:23377‑M1/145‑149 (MQ=255)  cccgcattcatcactgcgccgcccagcgccgcaccgatcgcattgcccaggtttaacgcgccaatgttctccgcagaggccaggttgggggcatccttggccgcttccatgacccgcatttgcagcggcggcaccagggcaaagCTGGc                                                                                                                                               >  7:28403‑M1/145‑149 (MQ=255)         cTGGTGCTGTTCGGTGTCGGCCTGACCTTGGGCAACGTGTGGGGTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGc                                                                                                                                         <  6:154135/148‑1 (MQ=255)              gCTGTTCGGTGTCGGCCTGACCTTGGGCAACGTGTGGGGTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCg                                                                                                                                   >  3:188988/1‑149 (MQ=255)                  cgccgcccagcgccgcaccgatcgcattgcccaggttgaacgcgccaatgttcaccgcagaggccaggttgggggcatccttggccgcttccatgacccgcatttgcagcggcggcactagggcaaagCTGGCCGCTGCCGACCGCCtt                                                                                                                               <  3:399053‑M1/21‑1 (MQ=255)                     ggTGTCGGCCTGACCTTGGGCAAGGTGTGGGGGGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTgg                                                                                                                             <  6:312364/148‑1 (MQ=255)                     ggTGTCGGCCTGACCTTGGGCAACGTGTGGGGTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTgg                                                                                                                             <  2:385450/148‑1 (MQ=255)                           ggCCTGACCTTGGGCAACGTGTGGGGTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATcc                                                                                                                       <  2:41340/148‑1 (MQ=255)                           ggCCTGACCTTGGGCAACGTGTGGGGTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCt                                                                                                                      >  5:237265/1‑149 (MQ=255)                           ggCCTGACCTTGGGCAACGTGTGGGGTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCt                                                                                                                      >  1:313613/1‑149 (MQ=255)                            gCCTGACCTTGGGCAACGTGTGGGGTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTg                                                                                                                     <  6:237265/149‑1 (MQ=255)                              cTGCCCTTGGGCAACGTGTGGGGTGGCAATGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGt                                                                                                                   >  7:120474/1‑149 (MQ=255)                                 aCCTTGGGCAACGTGTGGGGTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTg                                                                                                                >  4:254868/1‑149 (MQ=255)                                 aCCTTGGGCAACGTGTGGGGTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTg                                                                                                                >  5:405879/1‑149 (MQ=255)                                  ccTTGGGCAACGTGTGGGGTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTgg                                                                                                               >  3:315968/1‑149 (MQ=255)                                   cTTGGGCAACGTGTGGGGTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTggg                                                                                                              <  6:405879/149‑1 (MQ=255)                                    ttGGGCAACGTGTGGGGTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATGCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTgggg                                                                                                             >  2:152520/1‑149 (MQ=255)                                    cgatcgcattgcccaggttgaacgcgccaatgttcaccgcagaggccaggttgggggcatccttggccgcttccatgacccgcatttgcagcggcggcaccagggcaaagCTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTgggg                                                                                                             <  8:145808‑M1/39‑1 (MQ=255)                                        tcAACGTGTGGGGTGGCATGGCGGCGGACCTCTCGATCGATCGCACTCTGTTCCTGTCACTGGCTGGGCTGATTGGCGTGCTGCTGGTGTATCCGCTGGTACTGGTCTGGCCGCTGCAGACCGACTTGGCGTTGCTGGTCTGTGGTGCg                                                                                                         <  6:61019/148‑1 (MQ=255)                                            ttgcccaggttgaacgcgccaatgttcaccgcagaggccaggttgggggcatccttggccgcttccatgacccgcatttgcagcggcggcaccagggcaaagCTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCa                                                                                                     >  7:145808‑M1/103‑149 (MQ=255)                                                 ggggTGGCAAGGCGGCGGACCGCTCGATCGATCACACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCttt                                                                                                >  8:89408/1‑149 (MQ=255)                                                 caggttgaacgcgccaatgttcaccgcagaggccaggttgggggcatccttggccgcttccatgacccgcatttgcagcggcggcactagggcaaagCTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCttt                                                                                                >  4:399053‑M1/98‑149 (MQ=255)                                                  gggTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCttt                                                                                                <  7:45327/148‑1 (MQ=255)                                                        cAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGt                                                                                                                   >  2:263830/1‑123 (MQ=255)                                                        cAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGt                                                                                                                   <  1:263830/123‑1 (MQ=255)                                                          aGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTg                                                                                       >  7:43311/1‑149 (MQ=255)                                                            gcggcgGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTgcc                                                                                     >  2:175515/1‑149 (MQ=255)                                                            gcggcgGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTgcc                                                                                     >  2:169457/1‑149 (MQ=255)                                                                   aCCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCGGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTg                                                                              <  8:27270/149‑1 (MQ=255)                                                                    ccGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGc                                                                             <  8:120474/149‑1 (MQ=255)                                                                          gatcgatgGCACTCTGATCCTGTCACTGACTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGc                                                                       <  5:298069/149‑1 (MQ=255)                                                                            tcgatcaCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCgg                                                                     <  7:89408/149‑1 (MQ=255)                                                                                    aCTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATgg                                                              >  3:402075/1‑148 (MQ=255)                                                                                                  aCTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGccgccg                                                                                 <  2:233801/115‑1 (MQ=255)                                                                                                  aCTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGccgccg                                                                                 >  1:233801/1‑115 (MQ=255)                                                                                                      gctgggctgATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGc                                                       <  4:80802/137‑1 (MQ=255)                                                                                                      gctgggctgATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGc                                                       >  3:80802/1‑137 (MQ=255)                                                                                                                      tgctgcTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCg                           <  4:402075/149‑1 (MQ=255)                                                                                                                      tgctgcTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCg                           >  6:243363/1‑149 (MQ=255)                                                                                                                        ctgctgGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGt                         <  7:100634/149‑1 (MQ=255)                                                                                                                         tgctgGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTg                        <  1:175515/149‑1 (MQ=255)                                                                                                                          gctgGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGa                       <  8:43311/149‑1 (MQ=255)                                                                                                                           ctgGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTg                        <  1:169457/147‑1 (MQ=255)                                                                                                                           ctgGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTg                        <  4:315968/147‑1 (MQ=255)                                                                                                                            tgGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGcc                                                                                             <  6:51744/77‑1 (MQ=255)                                                                                                                            tgGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGcc                                                                                             >  5:51744/1‑77 (MQ=255)                                                                                                                              gtgtTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACAt                   >  4:184890/1‑149 (MQ=255)                                                                                                                              gtgtTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGGGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAAc                     <  3:254868/147‑1 (MQ=255)                                                                                                                                 tttCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGACCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTgg                >  2:379149/1‑149 (MQ=255)                                                                                                                                   tCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGGGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGGCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGgc               <  4:188988/148‑1 (MQ=255)                                                                                                                                      gCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGt           >  7:26227/1‑149 (MQ=255)                                                                                                                                       cTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGACCCTTGGCGCGtt          >  4:83861/1‑149 (MQ=255)                                                                                                                                               ggactggCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTgg  >  3:25112/1‑149 (MQ=255)                                                                                                                                                gactggCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGt                                                                                        <  7:90552/62‑1 (MQ=255)                                                                                                                                                gactggCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGt                                                                                        >  8:90552/1‑62 (MQ=255)                                                                                                                                                  |                                                                                                                                                  CGGCCATGCTGGTGCTGTTCGGTGTCGGCCTGACCTTGGGCAACGTGTGGGGTGGCAAGGCGGCGGACCGCTCGATCGATCGCACTCTGATCCTGTCACTGGCTGGGCTGATTGCCGTGCTGCTGGTGTTTCCGCTGGTACTGGACTGGCCGCTGCCGACCGCCTTGGCGATCCTGGTCTGGGGTGCGGCCAGCTTTGCCCTGGTGCCGCCGCTGCAAATGCGGGTCATGGAAGCGGCCAAGGATGCCCCCAACCTGGCCTCTGCGGTGAACATTGGCGCGTTCAACCTGG  >  NC_002947/2880877‑2881167

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.