| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2921662 | 39 (0.600) | 3 (0.050) | 3/256 | NT | 7.7% | coding (10682/10827 nt) | PP_2561 | hemolysin‑type calcium‑binding bacteriocin |
| ? | NC_002947 | = 2921684 | 34 (0.540) | coding (10704/10827 nt) | PP_2561 | hemolysin‑type calcium‑binding bacteriocin | |||||
CGATGGAAACGATGTGTTCCAGTTCGCTGCAGGCTTTGGCAACGACCTGATCATCAATTTCGATGCCATTGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2921546‑2921662‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcacACTGGCACCAAAGGTGGCTGCGGTGATGTTGA < NC_002947/2921684‑2921653 CGATGGAAACGATGTGTTCCAGTTCGCTGCAGGCTTTGGCAACGACCTGATCATCAATTTCGATGCCATTGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCACACTGGCACCAAAGGTGGCTGCGGTGATGTTGA < 3:223363/149‑1 CATCAATTTCGATGCCATTGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCACACTGGCACCAAAGGTGGCTGCGGTG > 7:160200/1‑91 CATCAATTTCGATGCCATTGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCACACTGGCACCAAAGGTGGCTGCGGTG < 8:160200/91‑1 CGATGGAAACGATGTGTTCCAGTTCGCTGCAGGCTTTGGCAACGACCTGATCATCAATTTCGATGCCATTGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2921546‑2921662‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcacACTGGCACCAAAGGTGGCTGCGGTGATGTTGA < NC_002947/2921684‑2921653 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |