New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2921662	39 (0.600)	3 (0.050)	3/256	NT	7.7%	coding (10682/10827 nt)	PP_2561	hemolysin‑type calcium‑binding bacteriocin
	?	NC_002947	= 2921684	34 (0.540)					coding (10704/10827 nt)	PP_2561	hemolysin‑type calcium‑binding bacteriocin

TGGAAACGATGTGTTCCAGTTCGCTGCAGGCTTTGGCAACGACCTGATCATCAATTTCGATGCCATTGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCGACTCCATACGTTTGGTGGGGGTGGCAGATGCAACCACGGTGACCGCCGCAGACTTCATCCTGGCCGGTTGAGGGGGCGCTGGGGTTAG  >  NC_002947/2921549‑2921824                                                                                                                                        |                                                                                                                                             tGGAAACGATGTGTTCCAGTTCGCTGCAGGCTTTGGCAACGACCTGATCATCAATTTCGATGCCATTGCGGCGGGTGGCAAGGACCGGCTGGATATAACCGCCCTCAACATCACCGCAGCCACCTTTGTTGCCAGTGTTACCATCGcc                                                                                                                                  >  5:26213/1‑148 (MQ=255)       cGATGTGTTCCAGTTCGCTGCAGGCTTTGGCAACGACCTGATCATCAATTTCGATGCCATTGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTg                                                                                                                           <  1:372087/149‑1 (MQ=255)          tgtgTTCCAGTTCGCTGCAGGCTTTGGCAACGACCTGATCATCAATTTCGATGCCATTGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTg                                                                                                                        >  5:357133/1‑149 (MQ=255)                    ttCGCTGCAGGCTTTGGCAACGACCTGATCATCAATTTCGATGCCATTGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCtt                                                                                                              <  1:192924/149‑1 (MQ=255)                      cGCTGCAGGCTTTGTCAACGACCTGATCATCAATTTCGATGCCATTGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGTCCATCGCCGATGTTGGTGCGGACACCTTg                                                                                                             <  1:189903/148‑1 (MQ=255)                                    gCAACGACCTGATCATCAATTTCGATGCCATTGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGtgct                                                                                              >  4:261235/1‑149 (MQ=255)                                    gCAACGACCTGATCATCAATTTCGATGCCATTGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGtgc                                                                                               <  2:130128/148‑1 (MQ=255)                                        cGACCTGATCATCAATTTCGATGCCATTGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCg                                                                                          <  2:5537/149‑1 (MQ=255)                                               atcatcAATTTCGATGCCATTGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACCTCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCGACTcc                                                                                     <  5:1247/147‑1 (MQ=255)                                               atcatcAATTTCGATGCCATTGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCGACTcc                                                                                     <  5:7030/147‑1 (MQ=255)                                                 catcaATTTCGATGCCATTGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGtgct                                                                                              <  8:25600/136‑1 (MQ=255)                                                 catcaATTTCGATGCCATTGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGtgct                                                                                              >  7:25600/1‑136 (MQ=255)                                                  atcaATTTCGATGCCATTGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCGACTCCATACg                                                                                >  4:384048/1‑149 (MQ=255)                                                     aaTTTCGATGCCATTGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCGACTCCATACGttt                                                                             >  7:213052/1‑149 (MQ=255)                                                            aTGCCATTGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCGACTCCATACGTTTGGTgggg                                                                      <  8:48913/149‑1 (MQ=255)                                                             tGCCATTGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCGACTCCATACGTTTGGTggggg                                                                     <  3:25880/149‑1 (MQ=255)                                                               ccATTGCGGCGGGTGGCCAGGACCGGCTGGATATCCCCGCCCTCAACATCACCGCAGCCACCATTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCGACTCCATACGTTTGGTGGGGGTg                                                                   >  7:257022/1‑149 (MQ=255)                                                               ccATTGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCGACTCCATACGTTTGGTGGGGGt                                                                    <  3:384048/148‑1 (MQ=255)                                                                  ttGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCGACTCCATACGTTTGGTGGGGGTGGCa                                                                <  3:261235/149‑1 (MQ=255)                                                                    gcggcgGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACAACTTGGTAAGCATCGGTGCTGCCGACTCCATACGTTTGGTGGGGGTgg                                                                  >  2:117148/1‑145 (MQ=255)                                                                         gggTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCGACTCCATACGTTTGGTGGGGGTGGCAGATGCaa                                                         >  5:61366/1‑149 (MQ=255)                                                                                cAGGACCGGCTGGATATCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCGACTCCATACGTTTGGTGGGGGTGGCAGATGCAACCACGGt                                                  >  7:124123/1‑149 (MQ=255)                                                                                 aGGACCGGCTGGATATCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCGACTCCATACGTTTGGTGGGGGTGGCAGATGCAACCACGGTg                                                 <  5:14803/149‑1 (MQ=255)                                                                                        gCTGGATATCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCGACTCCATACGTTTGGTGGGGGTGGCAGATGCAACCACGGTGAccgccg                                          >  2:29373/1‑149 (MQ=255)                                                                                              tatCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCGACTCCATACGTTTGGTGGGGGTGGCAGATGCAACCACGGTGACCGCCGCAGACt                                    <  6:357133/149‑1 (MQ=255)                                                                                                 cACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCGACTCCATACGTTTGGTGGGGGTGGCAg                                                               <  4:220919/119‑1 (MQ=255)                                                                                                 cACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCGACTCCATACGTTTGGTGGGGGTGGCAg                                                               >  3:220919/1‑119 (MQ=255)                                                                                                   ccGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGt                                                                                                           >  1:29817/1‑73 (MQ=255)                                                                                                   ccGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGt                                                                                                           <  2:29817/73‑1 (MQ=255)                                                                                                      cccTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCGACTCCATACGTTTGGTGGGGGTGGCAGATGCAACCACGGTGACCGCCGCAGACTTCATCCTg                            >  8:175457/1‑149 (MQ=255)                                                                                                       ccTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCGACTCCATACGTTTGGTGGGGGTGGCAGATGCAACCACGGTGACCGCCGCAGACTTCATCCTgg                           <  7:175457/149‑1 (MQ=255)                                                                                                        cTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCGACTCCATACGTTTGGTGGGGGTGGCAGATGCAACCACGGTGACCGCCGCAGACTTCATCCTGGc                          <  8:124123/149‑1 (MQ=255)                                                                                                         tCAACATCACCGCAGCCACCTTTGGTGCCAGTgtgatgttgagggcggtgatatccagccggtcctggccacccgccgcaatggcatcgaaattgatgatcaggtcgttgccaaagcctgcagcgaactggaacacatcgtttccatcg                         <  3:223363‑M2/149‑118 (MQ=255)                                                                                                                cACCGCAGCCACCTTTGGTGCCAGTgtgatgttgagggcggtgatatccagccggtcctggccacccgccgcaatggcatcgaaattgatg                                                                            >  7:160200‑M2/1‑25 (MQ=255)                                                                                                                cACCGCAGCCACCTTTGGTGCCAGTgtgatgttgagggcggtgatatccagccggtcctggccacccgccgcaatggcatcgaaattgatg                                                                            <  8:160200‑M2/91‑67 (MQ=255)                                                                                                                   cGCAGCCACCTTTGGTGCCATTTTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCGACTCCATACGTTTGGTGGGGGTGGCAGATGCAACCACGGTGACCGCCGCAGACTTCATCCTGGCCGGTTGAgggg               <  6:26213/149‑1 (MQ=255)                                                                                                                                 gTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCGACTCCATACGTTTGGTGGGGGTGGCAGATGTAACCACGGTGACCGCCGCAGACTTCATCCTGGCCGGTTGAGGGGGCGCTGGGGTTAg  <  8:213052/148‑1 (MQ=255)                                                                                                                                        |                                                                                                                                             TGGAAACGATGTGTTCCAGTTCGCTGCAGGCTTTGGCAACGACCTGATCATCAATTTCGATGCCATTGCGGCGGGTGGCCAGGACCGGCTGGATATCACCGCCCTCAACATCACCGCAGCCACCTTTGGTGCCAGTGTGACCATCGCCGATGTTGGTGCGGACACCTTGGTAAGCATCGGTGCTGCCGACTCCATACGTTTGGTGGGGGTGGCAGATGCAACCACGGTGACCGCCGCAGACTTCATCCTGGCCGGTTGAGGGGGCGCTGGGGTTAG  >  NC_002947/2921549‑2921824

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.