New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2954950 =	42 (0.650)	3 (0.050)	3/246	NT	6.8%	coding (173/843 nt)	PP_2587	LuxR family transcriptional regulator
	?	NC_002947	2955026 =	43 (0.710)					coding (249/843 nt)	PP_2587	LuxR family transcriptional regulator

TCGAAGTGGTCGGGTGCCACTTCGAACAGGCCGTAACAACCGGATTCGACCTGTTCCACACAAGCACCGTAGAACGGGTCGAGCAGGTAGAAGCCCGACAGGTAGCGGCTGACATTGCCCTCGGGCTGCCAGGGCGCCTTGTCATCCTGCTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2955103‑2954950 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgctcgaCCCGTTCTACGGTGCTTGTGTGGAACAGGTCGAATCCGGTTGTTACGGCCTGTTCGAAGTGGCACCCGACCACTTCGAGGTCAGCGAGTACTACCAATCGTTCTACCGCCACTCGCACCTGGAGGATGAACTCAACTACATCCTG  >  NC_002947/2955026‑2955170                                                                                                                                                                                                                                                                                                             TCGAAGTGGTCGGGTGCCACTTCGAACAGGCCGTAACAACCGGATTCGACCTGTTCCACACAAGCACCGTAGAACGGGTCGAGCAGGTAGAAGCCCGACAGGTAGCGGCTGACATTGCCCTCGGGCTGCCAGGGCGCCTTGTCATCCTG                                                                                                                                                        >  8:30602/1‑149  CGAAGTGGTCGGGTGCCACTTCGAACAGGCCGTAACAACCGGATTCGACCTGTTCCACACAAGCACCGTAGAACGGGTCGAGCAGGTAGAAGCCCGACAGGTAGCGGCTGACATTGCCCTCGGGCTGCCAGGGCGCCTTGTCATCCTGC                                                                                                                                                       >  7:254490/1‑149                     TTCGAACAGGCCGTAACAACCGGATTCGACCTGTTCCACACAAGCACCGTAGAACGGGTCGAGCAGGTAGAAGCCCGACAGGTAGCGGCTGACATTGCCCTCGGGCTGCCAGGGCGCCTTGTCATCCT                                                                                                                                                         >  5:322833/1‑128                     TTCGAACAGGCCGTAACAACCGGATTCGACCTGTTCCACACAAGCACCGTAGAACGGGTCGAGCAGGTAGAAGCCCGACAGGTAGCGGCTGACATTGCCCTCGGGCTGCCAGGGCGCCTTGTCATCCT                                                                                                                                                         <  6:322833/128‑1                                                                             GGTCGAGCAGGTAGAAGCCCGACAGGTAGCGGCTGACATTGCCCTCGGGCTGCCAGGGCGCCTTGTCATCCTGCTCGACCCGTTCTACGGTGCTTGTGTGGAACAGGTCGAATCCGGTTGTTACGGCCTGTTCGAAGTGGCACCCGAC                                                                             >  7:117374/1‑148                                                                                          GAAGCCCGACAGGTAGCGGCTGACATTGCCCTCGGGCTGCCAGGGCGCCTTGTCATCCTGCTCGACCCGTTCTACGGTGCTTGTGTGGAACAGGTCGAATC                                                                                                               <  5:395451/101‑1                                                                                          GAAGCCCGACAGGTAGCGGCTGACATTGCCCTCGGGCTGCCAGGGCGCCTTGTCATCCTGCTCGACCCGTTCTACGGTGCTTGTGTGGAACAGGTCGAATC                                                                                                               >  6:395451/1‑101                                                                                                                                                         GACCCGTTCTACGGTGCTTGTGTGGAACAGGTCGAATCCGGTTGTTACGGCCTGTTCGAAGTGGCACCCGACCACTTCGAGGTCAGCGAGTACTACCAATCGTTCTACCGCCACTCGCACCTGGAGGATGAACTCAACTACATCCTG  >  6:78544/1‑147                                                                                                                                                                                                                                                                                                             TCGAAGTGGTCGGGTGCCACTTCGAACAGGCCGTAACAACCGGATTCGACCTGTTCCACACAAGCACCGTAGAACGGGTCGAGCAGGTAGAAGCCCGACAGGTAGCGGCTGACATTGCCCTCGGGCTGCCAGGGCGCCTTGTCATCCTGCTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2955103‑2954950 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgctcgaCCCGTTCTACGGTGCTTGTGTGGAACAGGTCGAATCCGGTTGTTACGGCCTGTTCGAAGTGGCACCCGACCACTTCGAGGTCAGCGAGTACTACCAATCGTTCTACCGCCACTCGCACCTGGAGGATGAACTCAACTACATCCTG  >  NC_002947/2955026‑2955170

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.