New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3069869	44 (0.680)	4 (0.060)	4/256	NT	8.5%	coding (958/1521 nt)	aldB‑II	aldehyde dehydrogenase
	?	NC_002947	= 3069900	43 (0.680)					coding (989/1521 nt)	aldB‑II	aldehyde dehydrogenase

CATTTTCTTCGAAGACATCATGCAGGCCGAGCCGGCGTTCATCGAGAAGGCTGCCGAAGGCCTGGTGCTGGCGTTCTTCAACCAGGGCGAGGTGTGCACCTGCCCGTCACGGGCGCTGATCCAGGAGTCGATCTACGAACCGTTCATGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3069718‑3069869 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgCGGGTGATCTTGGCGATCTTCTTCATCACCTCGGCCATGA  <  NC_002947/3069900‑3069861                                                                                                                                                                                                  CATTTTCTTCGAAGACATCATGCAGGCCGAGCCGGCGTTCAACGAGAAGGCTGCCGAAGGCCTGGTGCTGGCGTTCTTCAACCAGGGCGAGGTGTGCACCTGCCCGTCACGGGCGCTGATCCAGGAGTCGATCTACGAACCGTTCATGG                                             <  5:349780/149‑1                          GCCGAGCCGGCGTTCATCGAGAAGGTTGCCGAAGGCCTGGTGCTGGCGTTCTTCAACCAGGGCGAGGTGTGCACCTGCCCGTCACGGGCGCTGATCCAGGAGTCGATCTACGAACCGTTCATGGCCGCGGGTGATCTTGGCGATCTTCT                    >  6:165499/1‑149                                            GAGAAGGTTGCCGAAGGCCTGGTGCTGGCGTTCTTCAACCAGGGCGAGGTGTGCACCTGCCCGTCACGGGCGCTGATCCAGGAGTCGATCTACGAACCGTTCATGGCCGCGGGTGATCTTGGCGATCTTCTTCATCACCTCGGCCATGA  <  5:165499/149‑1                                                                                     GGGCGAGGTGTGCACCTGCCCGTCACGGGCGCTGATCCAGGAGTCGATCTACGAACCGTTCATGGCCGCGGGTGATCTTGGCGATCTTCTTCATCACCTCGGC       >  7:185471/1‑103                                                                                     GGGCGAGGTGTGCACCTGCCCGTCACGGGCGCTGATCCAGGAGTCGATCTACGAACCGTTCATGGCCGCGGGTGATCTTGGCGATCTTCTTCATCACCTCGGC       <  8:185471/103‑1                                                                                                                                                                                                  CATTTTCTTCGAAGACATCATGCAGGCCGAGCCGGCGTTCATCGAGAAGGCTGCCGAAGGCCTGGTGCTGGCGTTCTTCAACCAGGGCGAGGTGTGCACCTGCCCGTCACGGGCGCTGATCCAGGAGTCGATCTACGAACCGTTCATGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3069718‑3069869 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgCGGGTGATCTTGGCGATCTTCTTCATCACCTCGGCCATGA  <  NC_002947/3069900‑3069861

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.