New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3436901	38 (0.580)	3 (0.050)	3/252	NT	6.5%	coding (27/879 nt)	PP_3056	tail fiber protein
	?	NC_002947	= 3436957	50 (0.810)					coding (83/879 nt)	PP_3056	tail fiber protein

GGTCGCCAATGCGCTGCGTACCCGTATCGTCGTGCGGGGTACGATGGAGGCTGTTTTATGAGTACCCCTTTACAACCTGTGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3436818‑3436901 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgatcTCGGCAGAAAGCCCTGTACTGGTGGCATTCCAGACTCCAGCCAGGCCTTTCTTGGTGATCACAG  <  NC_002947/3436957‑3436894                                                                                                                                                      GGTCGCCAATGCGCTGCGTACCCGTATCGTCGTGCGGGGTACGATGGAGGCTGTTTTATGAGTACCCCTTTACAACCTGTGATCTCGGCAGAAAGCCCTGTACTGGTGGCATTCCAGACTCCAGCCAGGCCTTTCTTGGTGATCACAG  <  5:89665/148‑1                                       GTACGATGGAGGCTGTTTTATGAGTACCCCTTTACAACCTGTGATCTCGGCAGAAAGCCCTGTACTGGTGGCATTCCAGACTCCAGCCAGGCCTTTCTTGGTGATCA     >  1:167265/1‑107                                       GTACGATGGAGGCTGTTTTATGAGTACCCCTTTACAACCTGTGATCTCGGCAGAAAGCCCTGTACTGGTGGCATTCCAGACTCCAGCCAGGCCTTTCTTGGTGATCA     <  2:167265/107‑1                                                                                                                                                      GGTCGCCAATGCGCTGCGTACCCGTATCGTCGTGCGGGGTACGATGGAGGCTGTTTTATGAGTACCCCTTTACAACCTGTGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3436818‑3436901 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgatcTCGGCAGAAAGCCCTGTACTGGTGGCATTCCAGACTCCAGCCAGGCCTTTCTTGGTGATCACAG  <  NC_002947/3436957‑3436894

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.