| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3507486 | 38 (0.580) | 4 (0.070) | 4/244 | NT | 10.1% | coding (804/969 nt) | PP_3104 | hypothetical protein |
| ? | NC_002947 | = 3507509 | 36 (0.600) | coding (827/969 nt) | PP_3104 | hypothetical protein | |||||
CAAATTAGGCGGCGCATTGGCGTTCGGCCCCCAGGCTTACCTAGATGCGACGGAGGCAAAAAGCGTCTCGGAGTTCTTCCAGAAGTCAGCTTACACCCAGCCGACCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3507378‑3507486‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgaccaatACACCGACACCAAAGGCCAATGCATTGGTCGGCTGGGTGTAAGCTGACTTCTGGAAGAACTCCGAGACGCTTTTTGCCTCCGTCGCATCTAGGTAAGCCTGGGGGCCGAACGCCAATGCGCCGCCTAATTTGGCCCCCGT < NC_002947/3507509‑3507370 CAAATTAGGCGGCGCATTGGCGTTCGGCCCCCAGGCTTACCTAGATGCGACGGAGGCAAAAAGCGTCTCGGAGTTCTTCCAGAAGTCAGCTTACACCCAGCCGACCAATACACCGACACCAAAGGCCAATGCATTGGTCGG < 3:235979/141‑1CAAATTAGGCGGCGCATTGGCGTTCGGCCCCCAGGCTTACCTAGATGCGACGGAGGCAAAAAGCGTCTCGGAGTTCTTCCAGAAGTCAGCTTACACCCAGCCGACCAATACACCGACACCAAAGGCCAATGCATTGGTCGG > 4:235979/1‑141 GCGCATTGGCGTTCGGCCCCCAGGCTTACCTAGATGCGACGGAGGCAAAAAGCGTCTCGGAGTTCTTCCAGAAGTCAGCTTACACCCAGCCGACCAATACACCGACACCAAAGGCCAATGCATTGGTCG > 5:35244/1‑129 GCGCATTGGCGTTCGGCCCCCAGGCTTACCTAGATGCGACGGAGGCAAAAAGCGTCTCGGAGTTCTTCCAGAAGTCAGCTTACACCCAGCCGACCAATACACCGACACCAAAGGCCAATGCATTGGTCG < 6:35244/129‑1 CCGACCAATACACCGACACCAAAGGCCAATGCAGTGGTCGGCTGGGTGTAAGCTGACTTCTGGAAGAACTCCGAGACGCTTTTTGCCTCCGTCGCATCTAGCTAAGCCTGGGGGCCGAACGCCAATGCGCCGCCTAATTTGGCCCCCGT > 6:66943/1‑149 CAAATTAGGCGGCGCATTGGCGTTCGGCCCCCAGGCTTACCTAGATGCGACGGAGGCAAAAAGCGTCTCGGAGTTCTTCCAGAAGTCAGCTTACACCCAGCCGACCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3507378‑3507486‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgaccaatACACCGACACCAAAGGCCAATGCATTGGTCGGCTGGGTGTAAGCTGACTTCTGGAAGAACTCCGAGACGCTTTTTGCCTCCGTCGCATCTAGGTAAGCCTGGGGGCCGAACGCCAATGCGCCGCCTAATTTGGCCCCCGT < NC_002947/3507509‑3507370 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |