New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3617158 =	47 (0.720)	5 (0.080)	5/254	NT	9.9%	coding (183/1170 nt)	PP_3188	hypothetical protein
	?	NC_002947	3617187 =	46 (0.730)					coding (212/1170 nt)	PP_3188	hypothetical protein

ACCAGTGCAGTGCCGATCAGGTGGGTGACCACCACCATCTTCAGCGCGTAGGGCTGTTCGATCAGTGGCAAGCCCAGTTGCTCGGCGCGCGCGACAACGGGCGCCGGGATGCTCTGGATGAAACTGCCGCCGGTGAGAATCACCATGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3617310‑3617158 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCGGCACTGCACTGGTGCAAATGAGCCAGGTACGCCG  >  NC_002947/3617187‑3617331                                                                                                                                                                                                                                                                                                            ACCAGTGCAGTGCCGATCAGGTGGGTGACCACCACCATCTTCAGCGCGTAGGGCTGTTCGATCAGTGGCAAGCCCAGTTGCTCGGCGCGCGCGACAACGGGCGCCGGGATGCTCTGGATGAAACTGCCGCCGGTGAGAATCACCATGCC                                                                                                                                                       >  8:350513/1‑149                                                                                                                    GGATGAAACTGCCGCCGGTGAGAATCCCCATGCCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCCCCCACCTGATCG                                    >  6:244611/1‑149                                                                                                                      ATGAAACTGCCGCCGGTGAGAATCACCATGCCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGA                                                            <  5:274411/123‑1                                                                                                                      ATGAAACTGCCGCCGGTGAGAATCACCATGCCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGA                                                            >  6:274411/1‑123                                                                                                                           ACTGCCGCCGGTGAGAATCACCATGCCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGT                                                     >  5:36351/1‑125                                                                                                                           ACTGCCGCCGGTGAGAATCACCATGCCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGT                                                     <  6:36351/125‑1                                                                                                                                                      GGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCGGCACTTCACTGGTGCAAATGAGCCAGGTACGCCG  <  2:172602/149‑1                                                                                                                                                                                                                                                                                                            ACCAGTGCAGTGCCGATCAGGTGGGTGACCACCACCATCTTCAGCGCGTAGGGCTGTTCGATCAGTGGCAAGCCCAGTTGCTCGGCGCGCGCGACAACGGGCGCCGGGATGCTCTGGATGAAACTGCCGCCGGTGAGAATCACCATGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3617310‑3617158 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCGGCACTGCACTGGTGCAAATGAGCCAGGTACGCCG  >  NC_002947/3617187‑3617331

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.