New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3617158 = | 47 (0.720) | 5 (0.080) | 5/254 | NT | 9.9% | coding (183/1170 nt) | PP_3188 | hypothetical protein |
? | NC_002947 | 3617187 = | 46 (0.730) | coding (212/1170 nt) | PP_3188 | hypothetical protein |
AACGAGGGTATCGCCGAATGGGTGATGGGCGGTGAACTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCGGCACTGCACTGGTGCAAATGAGCCAGGTACGCCG > NC_002947/3617039‑3617331 | aaCGAGGGTATCGCCGAATGGGTGATGGGCGGTGAACTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAg > 3:351694/1‑149 (MQ=255) gAGGGTATCGCCGAATGGGTGATGGGCGGTGAACTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGttt > 1:55700/1‑149 (MQ=255) cgatcaggtgggggaccaccaccatcttcagcgcgtagggctgttcgatcagtggcaagcccagttgctcggcgcgcgcgacaacgggcgccgggatgctctggatgaaacTGCCGGCATGGGGATTCTCACCGGCGGCAGTTTCATcc > 6:244611‑M1/112‑149 (MQ=255) gCCGAATGGGTGATGGGCGGTGAACTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCagag > 7:261373/1‑149 (MQ=255) aTGGGTGATGGGCGGTGAACTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATcc < 4:96865/149‑1 (MQ=255) accaccatcttcagcgcgtagggctgttcgatcagtggcaagcccagttgctcggcgcgcgcgacaacgggcgccgggatgctctggatgaaacTGCCGGCATGGTGATTCTCACCGGCGGCAGt > 5:36351‑M1/95‑125 (MQ=255) accaccatcttcagcgcgtagggctgttcgatcagtggcaagcccagttgctcggcgcgcgcgacaacgggcgccgggatgctctggatgaaacTGCCGGCATGGTGATTCTCACCGGCGGCAGt < 6:36351‑M1/31‑1 (MQ=255) tcttcagcgcgtagggctgttcgatcagtggcaagcccagttgctcggcgcgcgcgacaacgggcgccgggatgctctggatgaaacTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCAt < 5:274411‑M1/36‑1 (MQ=255) tcttcagcgcgtagggctgttcgatcagtggcaagcccagttgctcggcgcgcgcgacaacgggcgccgggatgctctggatgaaacTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCAt > 6:274411‑M1/88‑123 (MQ=255) aaCTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCagag > 5:72937/1‑127 (MQ=255) aaCTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCagag < 6:72937/127‑1 (MQ=255) aCTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATc > 1:229126/1‑121 (MQ=255) aCTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATc < 2:229126/121‑1 (MQ=255) gTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCTGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGTCGCCCCTTCTcgcgcgccc > 8:312744/1‑147 (MQ=255) gTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCgcgcgcgc > 1:367050/1‑149 (MQ=255) gTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTGTCATCCAGAGCATCCCGGCGCCCGTTGTCgcgcgcgc > 8:353753/1‑149 (MQ=255) aCCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCAt > 3:401284/1‑107 (MQ=255) aCCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCAt < 4:401284/107‑1 (MQ=255) cGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTgg > 7:251033/1‑149 (MQ=255) cATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCt > 5:8034/1‑149 (MQ=255) accaccCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCa < 8:251033/149‑1 (MQ=255) accaccCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCa < 1:350858/149‑1 (MQ=255) accaccCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCa > 4:197973/1‑149 (MQ=255) accaccCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCa > 1:259228/1‑149 (MQ=255) cccGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGa > 1:48730/1‑149 (MQ=255) gagtctaaGCCAAACTGCTTAGCCTGTTGTAGGATGGCGACGCCGTGGGCATTGCCGGCATTGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGaa < 7:312744/143‑1 (MQ=255) ggcgAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGaa > 8:204882/1‑147 (MQ=255) cgAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGc < 6:8034/149‑1 (MQ=255) gCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTa > 6:360803/1‑149 (MQ=255) aCCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTAcgcg > 2:388735/1‑149 (MQ=255) aGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGa < 2:26772/148‑1 (MQ=255) cTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGAGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGAtggt > 4:398120/1‑149 (MQ=255) gtggAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCACCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGAtggtg < 2:13435/147‑1 (MQ=255) tggAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGAtggtggtg > 1:172602/1‑149 (MQ=255) tggAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGAtggtggtg < 4:351694/149‑1 (MQ=255) tggAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGAtggtggtg < 1:388735/149‑1 (MQ=255) tggAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGAtggtggtg > 2:56137/1‑149 (MQ=255) gaggaTGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGAtggtggtgg < 3:197973/148‑1 (MQ=255) gaTGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCGCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTcac > 3:67388/1‑149 (MQ=255) tGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTcacc > 3:170696/1‑148 (MQ=255) gCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTcacccac > 7:259750/1‑149 (MQ=255) cGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTcacccacc > 7:350513/1‑149 (MQ=255) ggatgaaactgccgccggtgagaatccccatgccggcaGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCCCCCACCTGATCg > 6:244611‑M2/39‑149 (MQ=255) gTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCgg > 3:288483/1‑149 (MQ=255) gTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCgg > 2:86420/1‑149 (MQ=255) tGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCgg > 1:117921/1‑148 (MQ=255) atgaaactgccgccggtgagaatcaccatgccggcaGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGa > 6:274411‑M2/37‑123 (MQ=255) atgaaactgccgccggtgagaatcaccatgccggcaGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGa < 5:274411‑M2/87‑1 (MQ=255) ggCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCGgcac > 2:217650/1‑149 (MQ=255) gCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCGgcact < 1:86420/149‑1 (MQ=255) cATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCGgcactg < 5:360803/149‑1 (MQ=255) actgccgccggtgagaatcaccatgccggcaGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGAtggtggt < 6:36351‑M2/94‑1 (MQ=255) actgccgccggtgagaatcaccatgccggcaGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGAtggtggt > 5:36351‑M2/32‑125 (MQ=255) GGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCGGCACTGCACTGGt > 8:350513‑M1/1‑149 (MQ=255) gTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCGGCACTGCACTGGTGCaaa < 7:353753/148‑1 (MQ=255) gTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCGGCACTGCACTGGTGCAAAt > 3:69878/1‑149 (MQ=255) aTTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCGGCACTGCACTGGTGCAAATGa < 2:259228/148‑1 (MQ=255) aTTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCGGCACTGCACTGGTGCAAATGa < 1:56137/148‑1 (MQ=255) tcACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCGGCACTGCACTGGTGCAAATGa < 1:158454/144‑1 (MQ=255) aCCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCGGCACTGCACTGGTGCAAATGAGCCAg < 4:67388/147‑1 (MQ=255) ggcaGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCGGCACTTCACTGGTGCAAATGAGCCAGGTAcgccg < 2:172602‑M2/145‑1 (MQ=255) | AACGAGGGTATCGCCGAATGGGTGATGGGCGGTGAACTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCGGCACTGCACTGGTGCAAATGAGCCAGGTACGCCG > NC_002947/3617039‑3617331 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |