New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3617158 =	47 (0.720)	5 (0.080)	5/254	NT	9.9%	coding (183/1170 nt)	PP_3188	hypothetical protein
	?	NC_002947	3617187 =	46 (0.730)					coding (212/1170 nt)	PP_3188	hypothetical protein

GGGTACGCTGGCCTTACGTGGCGGAGAACGAGGGTATCGCCGAATGGGTGATGGGCGGTGAACTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCGGCACTG  >  NC_002947/3617013‑3617303                                                                                                                                                  |                                                                                                                                                  gggTACGCTGGCCTTACGTGGCGGAGAACGAGGGTATCGCCGAATGGGTGATGGGCGGTGAACTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGcc                                                                                                                                                <  5:359696/149‑1 (MQ=255) cggcgtacctggctcatttgcaccagtgaagtgccgatcaggtgggtgaccaccaccatcttcagcgcgtagggctgttcgatcagtggcaagcccagttgctcggcgcgcgcgacaacgggcgccgggatgctctggatgaaacTGcc                                                                                                                                                <  2:172602‑M1/4‑1 (MQ=255)       gCTGGCCTTACGTGGCGGAGAACGAGGGTATCGCCGAATGGGTGATGGGCGGTGAACTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATg                                                                                                                                          <  3:330757/149‑1 (MQ=255)       gCTGGCCTTACGTGGCGGAGAACGAGGGTATCGCCGAATGGGTGATGGGCGGTGAACTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATg                                                                                                                                          <  3:255435/149‑1 (MQ=255)                  gTGGCGGAGAACGAGGGTATCGCCGAATGGGTGATGGGCGGTGAACTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGAtt                                                                                                                                    >  5:76831/1‑144 (MQ=255)                  gTGGCGGAGAACGAGGGTATCGCCGAATGGGTGATGGGCGGTGAACTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGAtt                                                                                                                                    <  6:76831/144‑1 (MQ=255)                     gCGGAGAACGAGGGTATCGCCGAATGGGTGATGGGCGGTGAACTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACcgg                                                                                                                            >  6:122478/1‑149 (MQ=255)                      cGGAGAACGAGGGTATCGCCGAATGGGTGATGGGCGGTGAACTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACcggc                                                                                                                           <  1:17092/149‑1 (MQ=255)                      cGGAGAACGAGGGTATCGCCGAATGGGTGATGGGCGGTGAACTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACcggc                                                                                                                           <  6:200189/149‑1 (MQ=255)                           aaCGAGGGTATCGCCGAATGGGTGATGGGCGGTGAACTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAg                                                                                                                      >  3:351694/1‑149 (MQ=255)                              gAGGGTATCGCCGAATGGGTGATGGGCGGTGAACTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGttt                                                                                                                   >  1:55700/1‑149 (MQ=255)                                   cgatcaggtgggggaccaccaccatcttcagcgcgtagggctgttcgatcagtggcaagcccagttgctcggcgcgcgcgacaacgggcgccgggatgctctggatgaaacTGCCGGCATGGGGATTCTCACCGGCGGCAGTTTCATcc                                                                                                              >  6:244611‑M1/112‑149 (MQ=255)                                       gCCGAATGGGTGATGGGCGGTGAACTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCagag                                                                                                          >  7:261373/1‑149 (MQ=255)                                            aTGGGTGATGGGCGGTGAACTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATcc                                                                                                     <  4:96865/149‑1 (MQ=255)                                                    accaccatcttcagcgcgtagggctgttcgatcagtggcaagcccagttgctcggcgcgcgcgacaacgggcgccgggatgctctggatgaaacTGCCGGCATGGTGATTCTCACCGGCGGCAGt                                                                                                                     <  6:36351‑M1/31‑1 (MQ=255)                                                    accaccatcttcagcgcgtagggctgttcgatcagtggcaagcccagttgctcggcgcgcgcgacaacgggcgccgggatgctctggatgaaacTGCCGGCATGGTGATTCTCACCGGCGGCAGt                                                                                                                     >  5:36351‑M1/95‑125 (MQ=255)                                                           tcttcagcgcgtagggctgttcgatcagtggcaagcccagttgctcggcgcgcgcgacaacgggcgccgggatgctctggatgaaacTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCAt                                                                                                                >  6:274411‑M1/88‑123 (MQ=255)                                                           tcttcagcgcgtagggctgttcgatcagtggcaagcccagttgctcggcgcgcgcgacaacgggcgccgggatgctctggatgaaacTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCAt                                                                                                                <  5:274411‑M1/36‑1 (MQ=255)                                                             aaCTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCagag                                                                                                          <  6:72937/127‑1 (MQ=255)                                                             aaCTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCagag                                                                                                          >  5:72937/1‑127 (MQ=255)                                                              aCTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATc                                                                                                               <  2:229126/121‑1 (MQ=255)                                                              aCTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATc                                                                                                               >  1:229126/1‑121 (MQ=255)                                                                  gTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCTGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGTCGCCCCTTCTcgcgcgccc                                                                               >  8:312744/1‑147 (MQ=255)                                                                  gTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCgcgcgcgc                                                                               >  1:367050/1‑149 (MQ=255)                                                                  gTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTGTCATCCAGAGCATCCCGGCGCCCGTTGTCgcgcgcgc                                                                               >  8:353753/1‑149 (MQ=255)                                                                           aCCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCAt                                                                                                                >  3:401284/1‑107 (MQ=255)                                                                           aCCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCAt                                                                                                                <  4:401284/107‑1 (MQ=255)                                                                             cGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTgg                                                                    >  7:251033/1‑149 (MQ=255)                                                                                cATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCt                                                                 >  5:8034/1‑149 (MQ=255)                                                                                     accaccCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCa                                                            >  4:197973/1‑149 (MQ=255)                                                                                     accaccCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCa                                                            <  1:350858/149‑1 (MQ=255)                                                                                     accaccCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCa                                                            >  1:259228/1‑149 (MQ=255)                                                                                     accaccCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCa                                                            <  8:251033/149‑1 (MQ=255)                                                                                         cccGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGa                                                        >  1:48730/1‑149 (MQ=255)                                                                                              gagtctaaGCCAAACTGCTTAGCCTGTTGTAGGATGGCGACGCCGTGGGCATTGCCGGCATTGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGaa                                                   <  7:312744/143‑1 (MQ=255)                                                                                                ggcgAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGaa                                                   >  8:204882/1‑147 (MQ=255)                                                                                                  cgAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGc                                               <  6:8034/149‑1 (MQ=255)                                                                                                      gCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTa                                           >  6:360803/1‑149 (MQ=255)                                                                                                          aCCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTAcgcg                                       >  2:388735/1‑149 (MQ=255)                                                                                                                  aGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGa                                <  2:26772/148‑1 (MQ=255)                                                                                                                     cTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGAGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGAtggt                            >  4:398120/1‑149 (MQ=255)                                                                                                                        gtggAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCACCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGAtggtg                           <  2:13435/147‑1 (MQ=255)                                                                                                                         tggAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGAtggtggtg                        >  2:56137/1‑149 (MQ=255)                                                                                                                         tggAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGAtggtggtg                        >  1:172602/1‑149 (MQ=255)                                                                                                                         tggAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGAtggtggtg                        <  1:388735/149‑1 (MQ=255)                                                                                                                         tggAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGAtggtggtg                        <  4:351694/149‑1 (MQ=255)                                                                                                                           gaggaTGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGAtggtggtgg                       <  3:197973/148‑1 (MQ=255)                                                                                                                              gaTGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCGCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTcac                   >  3:67388/1‑149 (MQ=255)                                                                                                                                tGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTcacc                  >  3:170696/1‑148 (MQ=255)                                                                                                                                  gCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTcacccac               >  7:259750/1‑149 (MQ=255)                                                                                                                                   cGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTcacccacc              >  7:350513/1‑149 (MQ=255)                                                                                                                                          gTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCgg       >  2:86420/1‑149 (MQ=255)                                                                                                                                          gTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCgg       >  3:288483/1‑149 (MQ=255)                                                                                                                                           tGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCgg       >  1:117921/1‑148 (MQ=255)                                                                                                                                             ggCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCGgcac    >  2:217650/1‑149 (MQ=255)                                                                                                                                              gCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCGgcact   <  1:86420/149‑1 (MQ=255)                                                                                                                                               cATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCGgcactg  <  5:360803/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                  GGGTACGCTGGCCTTACGTGGCGGAGAACGAGGGTATCGCCGAATGGGTGATGGGCGGTGAACTGGTATTCGTCACCGGCATCAACCACCCGCGCGGCGAAGCCAACCTGCTGAGCCTGGTGGAGGATGGCGACGCCGTGGGCATTGCCGGCATGGTGATTCTCACCGGCGGCAGTTTCATCCAGAGCATCCCGGCGCCCGTTGTCGCGCGCGCCGAGCAACTGGGCTTGCCACTGATCGAACAGCCCTACGCGCTGAAGATGGTGGTGGTCACCCACCTGATCGGCACTG  >  NC_002947/3617013‑3617303

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.