| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3857801 = | 44 (0.680) | 3 (0.050) | 3/254 | NT | 7.2% | intergenic (+35/‑259) | PP_mr41/cbtA | Cobalamin regulatory region/cobalt transporter subunit A |
| ? | NC_002947 | 3857832 = | 35 (0.560) | intergenic (+66/‑228) | PP_mr41/cbtA | Cobalamin regulatory region/cobalt transporter subunit A | |||||
CAGCAAGCTGGCACCGACGGCGATGGTTACACGCTGGCTGAGCGTAACGGGGGTAGCAAGGCTGTGTTGTTTGGCGCTGGTGACGGGCATGACGCGATCCTCTGCTTTTTGTGGGCAATAGGCGAGCGCGGCAGCCCCGGACGTGGTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3857951‑3857801‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccTATTGCCCACAAAAAGCAGAGGATCGCGTCATGCCCGTCACCAGCGCCAAACAACACAGCCTTGCTACCCCCGTTACGCTCAGCCAGCGTGTAACCATCGCCGTCGGTGCCAGCTTGCTGGGTCTGTGCCTGGTCTACTTTGCCGGG > NC_002947/3857832‑3857978 CAGCAAGCTGGCACCGACGGCGATGGTTACACGCTGGCTGAGCGTAACGGGGGTAGCAAGGCTGTGTTGTTTGGCGCTGGTGACGGGCATGACGCGATCCTCTGCTTTTTGTGGGCAATAGGCGAGCGCGGCAGCCCCGGACGTGGTCG > 2:383118/1‑149 GCAATAGGCGAGCGCGGCAGCCCCGGACGTGGTCGCCTATTGCCCACAAAAAGCAGAGGATCGCGTCATGCCCGTCACCAGCGCCAAACAACACAGCCTTGCTACCCCCGTTACGCTCAGCCAGCGTGTAACCATCGCCGTCGGTGC > 2:798/1‑147 GCGAGCGCGGCAGCCCCGGACGTGGTCGCCTATTGCCCACAAAAAGCAGAGGATCGCGTCATGCCCGTCACCAGCGCCAAACAACACAGCCTTGCTACCCCCGTTACGCTCA < 7:258538/112‑1 GCGAGCGCGGCAGCCCCGGACGTGGTCGCCTATTGCCCACAAAAAGCAGAGGATCGCGTCATGCCCGTCACCAGCGCCAAACAACACAGCCTTGCTACCCCCGTTACGCTCA > 8:258538/1‑112 ggCTATTTCACTCAAAAAGAAGATGATCGCGTGATGCCCGTCACCAGCGCCAAACAACACAGCCTTGCTACCCCCGTTACGCTCAGCCAGCGTGTAACCATCGCCGTCGGTGCCAGCTTGCTGGGTCTGTGCCTGGTCTACTTTGCCGG < 6:283915/147‑1 GCCTATTGCCCACAAAAAGCAGAGGATCGCGTCATGCCCGTCACCAGCGCCAAACAACACAGCCTTGCTACCCCCGTTACGCTCAGCCAGCGTGTAACCATCGCCGTCGGTGCCAGCTTGCTGGGTCTGTGCCTGGTCTACTTTGCC < 8:318072/147‑1 CCTATTGCCCACAAAAAGCAGAGGATCGCGTCATGCCCGTCACCAGCGCCAAACAACACAGCCTTGCTACCCCCGTTACGCTCAGCCAGCGTGTAACCATCGCCGTCGGTGCCAGCTTGCTGGGTCTGTGCCTGGTCTACTTTGCCGGG < 3:19576/149‑1 CAGCAAGCTGGCACCGACGGCGATGGTTACACGCTGGCTGAGCGTAACGGGGGTAGCAAGGCTGTGTTGTTTGGCGCTGGTGACGGGCATGACGCGATCCTCTGCTTTTTGTGGGCAATAGGCGAGCGCGGCAGCCCCGGACGTGGTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3857951‑3857801‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccTATTGCCCACAAAAAGCAGAGGATCGCGTCATGCCCGTCACCAGCGCCAAACAACACAGCCTTGCTACCCCCGTTACGCTCAGCCAGCGTGTAACCATCGCCGTCGGTGCCAGCTTGCTGGGTCTGTGCCTGGTCTACTTTGCCGGG > NC_002947/3857832‑3857978 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |