New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3991309 = | 78 (1.200) | 5 (0.080) | 5/248 | NT | 7.6% | coding (318/894 nt) | PP_3517 | hypothetical protein |
? | NC_002947 | 3991355 = | 48 (0.790) | coding (272/894 nt) | PP_3517 | hypothetical protein |
GCGATGACTGGCGCACCTACATACCGCGCGGTGGTGTGCAACGCAGCGATGTGGATACCTTTCTCGAGCAGTATCGCGCACAGCACAGCATCGACATGTCAGGCGAGGGCAAGGCCATCCTGGCGGTGGGCGCCGGTCACTGGACCTTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3991460‑3991309 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttgcccTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAGGCGGGCTTCATCAGGTTTTTCCTGGC > NC_002947/3991355‑3991502 GCGATGACTGGCGCACCTACATACCGCGCGGTGGTGTGCAACGCAGCGATGTGGATACCTTTCTCGAGCAGTATCGCGCACAGCACAGCATCGACATGTCAGGCGAGGGCAAGGCCATCCTGGCGGTGGGCGCCGGTCACTGGACCTTG < 5:361912/149‑1 CGATGACTGGCGCACCTACATACCGCGCGGTGGGGTGCAACGCAGCGATGTGGATACCTTTCTCGAGCAGTATCGCGCACAGCACAGCATCGACATGTCAGGCGAGGGCAAGGCCATCCTGGCGGTGGGCGCCGGTCACTGGACCTTGC < 7:172487/149‑1 GAGGGCAAGGCCATCCTGGCGGTGGGCGCCGGTCACTGGACCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGT > 3:255978/1‑148 AGGGCAAGGCCATCCTGGCGGTGGGCGCCGGTCACTGGACCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCA > 3:286397/1‑149 GCAAGGCCATCCTGGCGGTGGGCGCCGGTCACTGGACCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAG > 1:209610/1‑143 GCAAGGCCATCCTGGCGGTGGGCGCCGGTCACTGGACCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAG < 2:209610/143‑1 GGCCATCCTGGCGGTGGGCGCCGGTCACTGGACCTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCA < 4:255978/149‑1 CTTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAGGCGGGCTTCATCAGGTTTTT < 7:277158/149‑1 TTGCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAGGCGGGCTTCATCAGGTTTTT > 5:234375/1‑148 GCCCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAGGCGGGCTTCATCAGGTTTTTC < 4:121691/147‑1 CCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAGGCGGGCTTCATCAGGTTTTTCCTGG > 4:212574/1‑149 CCTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAGGCGGGCTTCATCAGGTTTTTCCTGG > 7:170222/1‑149 CTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAGGCGGGCTTCATCAGGTTTTTCCTGGC > 7:313909/1‑149 GCGATGACTGGCGCACCTACATACCGCGCGGTGGTGTGCAACGCAGCGATGTGGATACCTTTCTCGAGCAGTATCGCGCACAGCACAGCATCGACATGTCAGGCGAGGGCAAGGCCATCCTGGCGGTGGGCGCCGGTCACTGGACCTTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3991460‑3991309 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttgcccTCGCCTGACATGTCGATGCTGTGCTGTGCGCGATACTGCTCGAGAAAGGTATCCACATCGCTGCGTTGCACACCACCGCGCGGTATGTAGGTGCGCCAGTCATCGCCCAGCAACTGGGCCAGGCGGGCTTCATCAGGTTTTTCCTGGC > NC_002947/3991355‑3991502 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |